A novel AA14 LPMO from Talaromyces rugulosus with bifunctional cellulolytic/hemicellulolytic activity boosted cellulose hydrolysis

IF 6.1 1区 工程技术 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Biotechnology for Biofuels Pub Date : 2024-02-23 DOI:10.1186/s13068-024-02474-9
Kaixiang Chen, Xu Zhao, Peiyu Zhang, Liangkun Long, Shaojun Ding
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Abstract

Background

The recently discovered PcAA14A and B from white-rot basidiomycete Pycnoporus coccineus enriched our understanding of the oxidative degradation of xylan in fungi, however, the unusual mode of action of AA14 LPMOs has sparked controversy. The substrate specificity and functionality of AA14 LPMOs still remain enigmatic and need further investigation.

Results

In this study, a novel AA14 LPMO was characterized from the ascomycete Talaromyces rugulosus. TrAA14A has a broad substrate specificity with strong oxidative activity on pure amorphous cellulose and xyloglucan. It could simultaneously oxidize cellulose, xylan and xyloglucan in natural hemi/cellulosic substrate such as fibrillated eucalyptus pulp, and released native and oxidized cello-oligosaccharides, xylo-oligosaccharides and xyloglucan oligosaccharides from this substrate, but its cellulolytic/hemicellulolytic activity became weaker as the contents of xylan increase in the alkaline-extracted hemi/cellulosic substrates. The dual cellulolytic/hemicellulolytic activity enables TrAA14A to possess a profound boosting effect on cellulose hydrolysis by cellulolytic enzymes. Structure modelling of TrAA14A revealed that it exhibits a relatively flat active-site surface similar to the active-site surfaces in AA9 LPMOs but quite distinct from PcAA14B, despite TrAA14A is strongly clustered together with AA14 LPMOs. Remarkable difference in electrostatic potentials of L2 and L3 surfaces was also observed among TrAA14A, PcAA14B and NcLPMO9F. We speculated that the unique feature in substrate-binding surface might contribute to the cellulolytic/hemicellulolytic activity of TrAA14A.

Conclusions

The extensive cellulolytic/hemicellulolytic activity on natural hemi/cellulosic substrate indicated that TrAA14A from ascomycete is distinctively different from previously characterized xylan-active AA9 or AA14 LPMOs. It may play as a bifunctional enzyme to decompose some specific network structures formed between cellulose and hemicellulose in the plant cell walls. Our findings shed new insights into the novel substrate specificities and biological functionalities of AA14 LPMOs, and will contribute to developing novel bifunctional LPMOs as the booster in commercial cellulase cocktails to efficiently break down the hemicellulose-cellulose matrix in lignocellulose.

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具有双功能纤维素分解/半纤维素分解活性的塔拉酵母菌新型 AA14 LPMO 可促进纤维素水解
背景最近从白腐基枝菌Pycnoporus coccineus中发现的PcAA14A和B丰富了我们对真菌中木质素氧化降解的认识,然而AA14 LPMOs不同寻常的作用模式引发了争议。结果在这项研究中,鉴定了一种新型 AA14 LPMO,它来自于无丝腔菌 Talaromyces rugulosus。TrAA14A 具有广泛的底物特异性,对纯无定形纤维素和木聚糖具有很强的氧化活性。它能同时氧化天然半纤维素/纤维素基质(如纤维化桉木浆)中的纤维素、木聚糖和木聚糖,并从该基质中释放出原生和氧化的纤维寡糖、木寡糖和木聚糖寡糖,但其纤维素分解/半纤维素分解活性随着碱提取半纤维素/纤维素基质中木聚糖含量的增加而减弱。纤维素分解/半纤维素分解的双重活性使 TrAA14A 对纤维素分解酶水解纤维素具有深远的促进作用。TrAA14A 的结构建模显示,尽管 TrAA14A 与 AA14 LPMOs 强烈地聚集在一起,但它表现出一个相对平坦的活性位点表面,与 AA9 LPMOs 的活性位点表面相似,但与 PcAA14B 截然不同。在 TrAA14A、PcAA14B 和 NcLPMO9F 中也观察到了 L2 和 L3 表面静电势的显著差异。结论 在天然半纤维素/纤维素基质上广泛的纤维素分解/半纤维素分解活性表明,来自子囊菌的 TrAA14A 与之前具有木聚糖活性的 AA9 或 AA14 LPMOs 有明显的不同。它可能是一种双功能酶,能分解植物细胞壁中纤维素和半纤维素之间形成的某些特定网络结构。我们的研究结果为了解 AA14 LPMOs 的新型底物特异性和生物功能提供了新的视角,并将有助于开发新型双功能 LPMOs 作为商业纤维素酶鸡尾酒的助推剂,以高效分解木质纤维素中的半纤维素-纤维素基质。
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来源期刊
Biotechnology for Biofuels
Biotechnology for Biofuels 工程技术-生物工程与应用微生物
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审稿时长
2.7 months
期刊介绍: Biotechnology for Biofuels is an open access peer-reviewed journal featuring high-quality studies describing technological and operational advances in the production of biofuels, chemicals and other bioproducts. The journal emphasizes understanding and advancing the application of biotechnology and synergistic operations to improve plants and biological conversion systems for the biological production of these products from biomass, intermediates derived from biomass, or CO2, as well as upstream or downstream operations that are integral to biological conversion of biomass. Biotechnology for Biofuels focuses on the following areas: • Development of terrestrial plant feedstocks • Development of algal feedstocks • Biomass pretreatment, fractionation and extraction for biological conversion • Enzyme engineering, production and analysis • Bacterial genetics, physiology and metabolic engineering • Fungal/yeast genetics, physiology and metabolic engineering • Fermentation, biocatalytic conversion and reaction dynamics • Biological production of chemicals and bioproducts from biomass • Anaerobic digestion, biohydrogen and bioelectricity • Bioprocess integration, techno-economic analysis, modelling and policy • Life cycle assessment and environmental impact analysis
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