Long Non-Coding RNA H19 Leads to Upregulation of γ-Globin Gene Expression during Erythroid Differentiation.

IF 1.2 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Hemoglobin Pub Date : 2024-01-01 Epub Date: 2024-02-29 DOI:10.1080/03630269.2023.2284950
Dan Xie, Yuanyuan Han, Wenyi Zhang, Jiangfen Wu, Banquan An, Shengwen Huang, Fa Sun
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Abstract

Long noncoding RNAs (lncRNAs) are important because they are involved in a variety of life activities and have many downstream targets. Moreover, there is also increasing evidence that some lncRNAs play important roles in the expression and regulation of γ-globin genes. In our previous study, we analyzed genetic material from nucleated red blood cells (NRBCs) extracted from premature and full-term umbilical cord blood samples. Through RNA sequencing (RNA-Seq) analysis, lncRNA H19 emerged as a differentially expressed transcript between the two blood types. While this discovery provided insight into H19, previous studies had not investigated its effect on the γ-globin gene. Therefore, the focus of our study was to explore the impact of H19 on the γ-globin gene. In this study, we discovered that overexpressing H19 led to a decrease in HBG mRNA levels during erythroid differentiation in K562 cells. Conversely, in CD34+ hematopoietic stem cells and human umbilical cord blood-derived erythroid progenitor (HUDEP-2) cells, HBG expression increased. Additionally, we observed that H19 was primarily located in the nucleus of K562 cells, while in HUDEP-2 cells, H19 was present predominantly in the cytoplasm. These findings suggest a significant upregulation of HBG due to H19 overexpression. Notably, cytoplasmic localization in HUDEP-2 cells hints at its potential role as a competing endogenous RNA (ceRNA), regulating γ-globin expression by targeting microRNA/mRNA interactions.

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长非编码 RNA H19 在红细胞分化过程中导致γ-球蛋白基因表达上调
长非编码 RNA(lncRNA)非常重要,因为它们参与多种生命活动,并有许多下游靶标。此外,越来越多的证据表明,一些 lncRNA 在γ-球蛋白基因的表达和调控中发挥着重要作用。在之前的研究中,我们分析了从早产儿和足月脐带血样本中提取的有核红细胞(NRBCs)的遗传物质。通过 RNA 测序(RNA-Seq)分析,lncRNA H19 成为两种血型之间的差异表达转录本。虽然这一发现让我们对 H19 有了更深入的了解,但之前的研究并未调查其对γ-球蛋白基因的影响。因此,我们的研究重点是探讨 H19 对γ-球蛋白基因的影响。在这项研究中,我们发现过表达 H19 会导致 K562 细胞在红细胞分化过程中 HBG mRNA 水平下降。相反,在 CD34+ 造血干细胞和人脐带血来源的红细胞祖细胞(HUDEP-2)中,HBG 表达增加。此外,我们观察到 H19 主要位于 K562 细胞的细胞核中,而在 HUDEP-2 细胞中,H19 主要存在于细胞质中。这些发现表明,H19 的过表达导致了 HBG 的显著上调。值得注意的是,H19 在 HUDEP-2 细胞中的细胞质定位暗示了它作为竞争性内源性 RNA(ceRNA)的潜在作用,即通过靶向 microRNA/mRNA 的相互作用来调节γ-球蛋白的表达。
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来源期刊
Hemoglobin
Hemoglobin 医学-生化与分子生物学
CiteScore
1.70
自引率
10.00%
发文量
59
审稿时长
3 months
期刊介绍: Hemoglobin is a journal in the English language for the communication of research and information concerning hemoglobin in humans and other species. Hemoglobin publishes articles, reviews, points of view The journal covers topics such as: structure, function, genetics and evolution of hemoglobins biochemical and biophysical properties of hemoglobin molecules characterization of hemoglobin disorders (variants and thalassemias), consequences and treatment of hemoglobin disorders epidemiology and prevention of hemoglobin disorders (neo-natal and adult screening) modulating factors methodology used for diagnosis of hemoglobin disorders
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