Rare, long-distance dispersal underpins genetic connectivity in the pink sea fan, Eunicella verrucosa

IF 3.5 2区 生物学 Q1 EVOLUTIONARY BIOLOGY Evolutionary Applications Pub Date : 2024-03-07 DOI:10.1111/eva.13649
Kirsty L. Macleod, Tom L. Jenkins, Matthew J. Witt, Jamie R. Stevens
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Abstract

Characterizing patterns of genetic connectivity in marine species is of critical importance given the anthropogenic pressures placed on the marine environment. For sessile species, population connectivity can be shaped by many processes, such as pelagic larval duration, oceanographic boundaries and currents. This study combines restriction-site associated DNA sequencing (RADseq) and passive particle dispersal modelling to delineate patterns of population connectivity in the pink sea fan, Eunicella verrucosa, a temperate octocoral. Individuals were sampled from 20 sites covering most of the species' northeast Atlantic range, and a site in the northwest Mediterranean Sea to inform on connectivity across the Atlantic-Mediterranean transition. Using 7510 neutral SNPs, a geographic cline of genetic clusters was detected, partitioning into Ireland, Britain, France, Spain (Atlantic), and Portugal and Spain (Mediterranean). Evidence of significant inbreeding was detected at all sites, a finding not detected in a previous study of this species based on microsatellite loci. Genetic connectivity was characterized by an isolation by distance pattern (IBD) (r2 = 0.78, p < 0.001), which persisted across the Mediterranean-Atlantic boundary. In contrast, exploration of ancestral population assignment using the program ADMIXTURE indicated genetic partitioning across the Bay of Biscay, which we suggest represents a natural break in the species' range, possibly linked to a lack of suitable habitat. As the pelagic larval duration (PLD) is unknown, passive particle dispersal simulations were run for 14 and 21 days. For both modelled PLDs, inter-annual variations in particle trajectories suggested that in a long-lived, sessile species, range-wide IBD is driven by rare, longer dispersal events that act to maintain gene flow. These results suggest that oceanographic patterns may facilitate range-wide stepping-stone genetic connectivity in E. verrucosa and highlight that both oceanography and natural breaks in a species' range should be considered in the designation of ecologically coherent MPA networks.

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粉红海扇(Eunicella verrucosa)稀有的远距离扩散是其基因连通性的基础
鉴于人类活动对海洋环境造成的压力,描述海洋物种的遗传连接模式至关重要。对于无梗物种来说,种群连通性可能受多种过程的影响,如浮游幼虫持续时间、海洋边界和洋流。本研究结合限制性位点相关 DNA 测序(RADseq)和被动颗粒扩散模型,对温带八目鳗(Eunicella verrucosa)的种群连通性模式进行了描述。研究人员从 20 个地点采集了个体样本,这些地点覆盖了该物种东北大西洋分布区的大部分地区,并在地中海西北部的一个地点采集了个体样本,以了解大西洋-地中海过渡带的连接情况。通过使用 7510 个中性 SNPs,发现了一个遗传集群的地理线,分为爱尔兰、英国、法国、西班牙(大西洋)以及葡萄牙和西班牙(地中海)。在所有地点都发现了明显的近亲繁殖现象,这是以前基于微卫星位点对该物种进行研究时没有发现的。遗传连接的特点是距离隔离模式(IBD)(r2 = 0.78, p < 0.001),这种模式在地中海-大西洋边界持续存在。与此相反,利用 ADMIXTURE 程序对祖先种群分配的研究表明,比斯开湾存在遗传分区,我们认为这代表了该物种分布范围的自然断裂,可能与缺乏合适的栖息地有关。由于中上层幼体持续时间(PLD)未知,我们对 14 天和 21 天的被动颗粒扩散进行了模拟。对于这两种模拟的 PLD,颗粒轨迹的年际变化表明,对于一种寿命长的无柄物种来说,整个分布区的 IBD 是由罕见的、较长的扩散事件驱动的,这些扩散事件起到了维持基因流的作用。这些结果表明,海洋学模式可能会促进疣鼻溞整个分布区的阶石遗传连接,并强调在指定具有生态连贯性的海洋保护区网络时,应同时考虑海洋学和物种分布区的自然断裂。
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来源期刊
Evolutionary Applications
Evolutionary Applications 生物-进化生物学
CiteScore
8.50
自引率
7.30%
发文量
175
审稿时长
6 months
期刊介绍: Evolutionary Applications is a fully peer reviewed open access journal. It publishes papers that utilize concepts from evolutionary biology to address biological questions of health, social and economic relevance. Papers are expected to employ evolutionary concepts or methods to make contributions to areas such as (but not limited to): medicine, agriculture, forestry, exploitation and management (fisheries and wildlife), aquaculture, conservation biology, environmental sciences (including climate change and invasion biology), microbiology, and toxicology. All taxonomic groups are covered from microbes, fungi, plants and animals. In order to better serve the community, we also now strongly encourage submissions of papers making use of modern molecular and genetic methods (population and functional genomics, transcriptomics, proteomics, epigenetics, quantitative genetics, association and linkage mapping) to address important questions in any of these disciplines and in an applied evolutionary framework. Theoretical, empirical, synthesis or perspective papers are welcome.
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