Specific molecular peak analysis by ion mobility spectrometry of volatile organic compounds in urine of COVID-19 patients: A novel diagnostic approach

IF 2.2 4区 医学 Q3 BIOCHEMICAL RESEARCH METHODS Journal of virological methods Pub Date : 2024-03-05 DOI:10.1016/j.jviromet.2024.114910
T. Boeselt , P. Terhorst , J. Kroenig , C. Nell , M. Spielmanns , U. Boas , M. Veith , C. Vogelmeier , T. Greulich , AR Koczulla , B. Beutel , J. Huber , H. Heers
{"title":"Specific molecular peak analysis by ion mobility spectrometry of volatile organic compounds in urine of COVID-19 patients: A novel diagnostic approach","authors":"T. Boeselt ,&nbsp;P. Terhorst ,&nbsp;J. Kroenig ,&nbsp;C. Nell ,&nbsp;M. Spielmanns ,&nbsp;U. Boas ,&nbsp;M. Veith ,&nbsp;C. Vogelmeier ,&nbsp;T. Greulich ,&nbsp;AR Koczulla ,&nbsp;B. Beutel ,&nbsp;J. Huber ,&nbsp;H. Heers","doi":"10.1016/j.jviromet.2024.114910","DOIUrl":null,"url":null,"abstract":"<div><h3>Introduction</h3><p>SARS-CoV-2 is usually diagnosed from naso-/oropharyngeal swabs which are uncomfortable and prone to false results. This study investigated a novel diagnostic approach to Covid-19 measuring volatile organic compounds (VOC) from patients’ urine.</p></div><div><h3>Methods</h3><p>Between June 2020 and February 2021, 84 patients with positive RT-PCR for SARS-CoV-2 were recruited as well as 54 symptomatic individuals with negative RT-PCR. Midstream urine samples were obtained for VOC analysis using ion mobility spectrometry (IMS) which detects individual molecular components of a gas sample based on their size, configuration, and charge after ionization.</p></div><div><h3>Results</h3><p>Peak analysis of the 84 Covid and 54 control samples showed good group separation. In total, 37 individual specific peaks were identified, 5 of which (P134, 198, 135, 75, 136) accounted for significant differences between groups, resulting in sensitivities of 89–94% and specificities of 82–94%. A decision tree was generated from the relevant peaks, leading to a combined sensitivity and specificity of 98% each.</p></div><div><h3>Discussion</h3><p>VOC-based diagnosis can establish a reliable separation between urine samples of Covid-19 patients and negative controls. Molecular peaks which apparently are disease-specific were identified. IMS is an additional non-invasive and cheap device for the diagnosis of this ongoing endemic infection. Further studies are needed to validate sensitivity and specificity.</p></div>","PeriodicalId":17663,"journal":{"name":"Journal of virological methods","volume":null,"pages":null},"PeriodicalIF":2.2000,"publicationDate":"2024-03-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S016609342400034X/pdfft?md5=7973be6a5159da6ab0dfee1f2f2374a2&pid=1-s2.0-S016609342400034X-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of virological methods","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S016609342400034X","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0

Abstract

Introduction

SARS-CoV-2 is usually diagnosed from naso-/oropharyngeal swabs which are uncomfortable and prone to false results. This study investigated a novel diagnostic approach to Covid-19 measuring volatile organic compounds (VOC) from patients’ urine.

Methods

Between June 2020 and February 2021, 84 patients with positive RT-PCR for SARS-CoV-2 were recruited as well as 54 symptomatic individuals with negative RT-PCR. Midstream urine samples were obtained for VOC analysis using ion mobility spectrometry (IMS) which detects individual molecular components of a gas sample based on their size, configuration, and charge after ionization.

Results

Peak analysis of the 84 Covid and 54 control samples showed good group separation. In total, 37 individual specific peaks were identified, 5 of which (P134, 198, 135, 75, 136) accounted for significant differences between groups, resulting in sensitivities of 89–94% and specificities of 82–94%. A decision tree was generated from the relevant peaks, leading to a combined sensitivity and specificity of 98% each.

Discussion

VOC-based diagnosis can establish a reliable separation between urine samples of Covid-19 patients and negative controls. Molecular peaks which apparently are disease-specific were identified. IMS is an additional non-invasive and cheap device for the diagnosis of this ongoing endemic infection. Further studies are needed to validate sensitivity and specificity.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
利用离子迁移谱法对 COVID-19 患者尿液中的挥发性有机化合物进行特定分子峰分析:一种新的诊断方法。
简介SARS-CoV-2 通常通过鼻/咽拭子进行诊断,这种方法既不方便又容易出现错误结果。本研究调查了一种新型诊断方法,即 Covid-19 测量患者尿液中的挥发性有机化合物(VOC):方法:2020 年 6 月至 2021 年 2 月期间,招募了 84 名 SARS-CoV-2 RT-PCR 阳性患者和 54 名 RT-PCR 阴性的无症状患者。采用离子迁移谱法(IMS)对中游尿液样本进行挥发性有机化合物分析:对 84 个 Covid 样品和 54 个对照样品进行的峰值分析表明,组别分离效果良好。共鉴定出 37 个特异性峰,其中 5 个(P134、198、135、75、136)在组间存在显著差异,灵敏度为 89-94%,特异度为 82-94%。根据相关峰值生成的决策树得出的综合灵敏度和特异度分别为 98%:讨论:基于挥发性有机化合物的诊断能可靠地区分 Covid-19 患者尿样和阴性对照。讨论:基于挥发性有机化合物的诊断能可靠地区分 Covid-19 患者尿样和阴性对照组尿样。IMS 是诊断这种持续流行感染的又一种非侵入性廉价设备。还需要进一步的研究来验证灵敏度和特异性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
CiteScore
5.80
自引率
0.00%
发文量
209
审稿时长
41 days
期刊介绍: The Journal of Virological Methods focuses on original, high quality research papers that describe novel and comprehensively tested methods which enhance human, animal, plant, bacterial or environmental virology and prions research and discovery. The methods may include, but not limited to, the study of: Viral components and morphology- Virus isolation, propagation and development of viral vectors- Viral pathogenesis, oncogenesis, vaccines and antivirals- Virus replication, host-pathogen interactions and responses- Virus transmission, prevention, control and treatment- Viral metagenomics and virome- Virus ecology, adaption and evolution- Applied virology such as nanotechnology- Viral diagnosis with novelty and comprehensive evaluation. We seek articles, systematic reviews, meta-analyses and laboratory protocols that include comprehensive technical details with statistical confirmations that provide validations against current best practice, international standards or quality assurance programs and which advance knowledge in virology leading to improved medical, veterinary or agricultural practices and management.
期刊最新文献
Rapid detection of bat coronaviruses from fecal samples using loop-mediated isothermal amplification assay in the field Establishment of a reverse genetics system for virulent systemic feline calicivirus using circular polymerase extension reaction Real-time quantitative reverse transcription PCR assay for the detection of Nuomin virus – An emerging tick-borne virus Efficient and accurate BmNPV bacmid editing system by two-step golden gate assembly Carboxy-PEG-thiol functionalized gold nanoparticle conjugates for the detection of SARS-CoV-2: Detection tools and analytical method development
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1