Recent Progress in High-Throughput Enzymatic DNA Synthesis for Data Storage

IF 5.5 3区 工程技术 Q1 BIOCHEMICAL RESEARCH METHODS BioChip Journal Pub Date : 2024-03-18 DOI:10.1007/s13206-024-00146-2
David Baek, Sung-Yune Joe, Haewon Shin, Chaewon Park, Seokwoo Jo, Honggu Chun
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Abstract

DNA has emerged as an attractive medium for storing large amounts of data due to its high information density, long-term stability, and low energy consumption. However, in contrast to commercially available storage media, DNA-based data storage currently falls behind in terms of writing and reading speeds, waste as well as cost. To harness the full potential of DNA as a data storage medium, it is imperative to advance high-throughput DNA synthesis without compromising cost and pollution. Industry-standard phosphoramidite DNA synthesis has reached its limitation because of its short nucleotide length (< 200), overconsumption of organic solvents leading to the production of toxic wastes, and slow writing speed. Enzymatic DNA synthesis shows promise as a replacement with long nucleotides, an environmentally friendly process, and fast writing speed. In this review, we overview enzymatic DNA synthesis methods, evaluate current methods that utilize high-throughput and parallel synthesis, and conclude with comments on how enzymatic DNA synthesis can be the answer to DNA data storage.

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用于数据存储的高通量酶法 DNA 合成的最新进展
DNA 因其高信息密度、长期稳定性和低能耗而成为存储大量数据的一种极具吸引力的介质。然而,与市场上现有的存储介质相比,基于 DNA 的数据存储目前在写入和读取速度、浪费以及成本等方面还比较落后。要充分利用 DNA 作为数据存储介质的潜力,必须在不影响成本和污染的前提下推进高通量 DNA 合成。工业标准的亚磷酰胺 DNA 合成由于核苷酸长度短(200)、过度消耗有机溶剂导致产生有毒废物以及写入速度慢而受到限制。酶法 DNA 合成具有核苷酸长、过程环保、写入速度快等优点,有望成为一种替代方法。在这篇综述中,我们概述了酶法 DNA 合成方法,评估了当前利用高通量和并行合成的方法,最后就酶法 DNA 合成如何成为 DNA 数据存储的答案发表了评论。
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来源期刊
BioChip Journal
BioChip Journal 生物-生化研究方法
CiteScore
7.70
自引率
16.30%
发文量
47
审稿时长
6-12 weeks
期刊介绍: BioChip Journal publishes original research and reviews in all areas of the biochip technology in the following disciplines, including protein chip, DNA chip, cell chip, lab-on-a-chip, bio-MEMS, biosensor, micro/nano mechanics, microfluidics, high-throughput screening technology, medical science, genomics, proteomics, bioinformatics, medical diagnostics, environmental monitoring and micro/nanotechnology. The Journal is committed to rapid peer review to ensure the publication of highest quality original research and timely news and review articles.
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