An optimized culture system for efficient derivation of porcine expanded potential stem cells from preimplantation embryos and by reprogramming somatic cells

IF 13.1 1区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS Nature Protocols Pub Date : 2024-03-20 DOI:10.1038/s41596-024-00958-4
Degong Ruan, Yiyi Xuan, Timothy Theodore Ka Ki Tam, ZhuoXuan Li, Xiao Wang, Shao Xu, Doris Herrmann, Heiner Niemann, Liangxue Lai, Xuefei Gao, Monika Nowak-Imialek, Pentao Liu
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Abstract

Pigs share anatomical and physiological traits with humans and can serve as a large-animal model for translational medicine. Bona fide porcine pluripotent stem cells (PSCs) could facilitate testing cell and drug therapies. Agriculture and biotechnology may benefit from the ability to produce immune cells for studying animal infectious diseases and to readily edit the porcine genome in stem cells. Isolating porcine PSCs from preimplantation embryos has been intensively attempted over the past decades. We previously reported the derivation of expanded potential stem cells (EPSCs) from preimplantation embryos and by reprogramming somatic cells of multiple mammalian species, including pigs. Porcine EPSCs (pEPSCs) self-renew indefinitely, differentiate into embryonic and extra-embryonic lineages, and permit precision genome editing. Here we present a highly reproducible experimental procedure and data of an optimized and robust porcine EPSC culture system and its use in deriving new pEPSC lines from preimplantation embryos and reprogrammed somatic cells. No particular expertise is required for the protocols, which take ~4–6 weeks to complete. Importantly, we successfully established pEPSC lines from both in vitro fertilized and somatic cell nuclear transfer-derived embryos. These new pEPSC lines proliferated robustly over long-term passaging and were amenable to both simple indels and precision genome editing, with up to 100% targeting efficiency. The pEPSCs differentiated into embryonic cell lineages in vitro and teratomas in vivo, and into porcine trophoblast stem cells in human trophoblast stem cell medium. We show here that pEPSCs have unique epigenetic features, particularly H3K27me3 levels substantially lower than fibroblasts. The protocol presents for an optimized culture system for deriving porcine expanded potential stem cells from preimplantation embryos and reprogrammed somatic cells, and for validation and characterization.

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从植入前胚胎和通过体细胞重编程高效衍生猪扩增潜能干细胞的优化培养系统
猪与人类具有相同的解剖和生理特征,可作为转化医学的大型动物模型。真正的猪多能干细胞(PSCs)有助于测试细胞和药物疗法。生产用于研究动物传染病的免疫细胞以及在干细胞中随时编辑猪基因组的能力可使农业和生物技术受益。过去几十年来,人们一直在努力从植入前胚胎中分离猪造血干细胞。我们曾报道过从植入前胚胎和通过对包括猪在内的多个哺乳动物物种的体细胞进行重编程衍生出扩增潜能干细胞(EPSCs)。猪扩增潜能干细胞(pEPSCs)可无限自我更新,分化成胚胎和胚胎外系,并可进行精确的基因组编辑。在这里,我们介绍了一个高度可重复的实验过程和数据,这是一个优化的、稳健的猪 EPSC 培养系统,可用于从植入前胚胎和重编程体细胞中获得新的 pEPSC 株系。该方案无需特殊的专业知识,只需约 4-6 周即可完成。重要的是,我们成功地从体外受精胚胎和体细胞核移植衍生胚胎中建立了 pEPSC 品系。这些新的 pEPSC 株系在长期传代过程中增殖旺盛,可进行简单的嵌合和精确的基因组编辑,靶向效率高达 100%。这些 pEPSCs 在体外分化成胚胎细胞系,在体内分化成畸胎瘤,在人类滋养层干细胞培养基中分化成猪滋养层干细胞。我们在此表明,pEPSCs 具有独特的表观遗传学特征,尤其是 H3K27me3 水平大大低于成纤维细胞。
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来源期刊
Nature Protocols
Nature Protocols 生物-生化研究方法
CiteScore
29.10
自引率
0.70%
发文量
128
审稿时长
4 months
期刊介绍: Nature Protocols focuses on publishing protocols used to address significant biological and biomedical science research questions, including methods grounded in physics and chemistry with practical applications to biological problems. The journal caters to a primary audience of research scientists and, as such, exclusively publishes protocols with research applications. Protocols primarily aimed at influencing patient management and treatment decisions are not featured. The specific techniques covered encompass a wide range, including but not limited to: Biochemistry, Cell biology, Cell culture, Chemical modification, Computational biology, Developmental biology, Epigenomics, Genetic analysis, Genetic modification, Genomics, Imaging, Immunology, Isolation, purification, and separation, Lipidomics, Metabolomics, Microbiology, Model organisms, Nanotechnology, Neuroscience, Nucleic-acid-based molecular biology, Pharmacology, Plant biology, Protein analysis, Proteomics, Spectroscopy, Structural biology, Synthetic chemistry, Tissue culture, Toxicology, and Virology.
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