Haplotype-based association study of TCF7L2 gene variants with the development of diabetic retinopathy in an Iranian population.

IF 1.2 4区 医学 Q4 GENETICS & HEREDITY Ophthalmic Genetics Pub Date : 2024-06-01 Epub Date: 2024-03-21 DOI:10.1080/13816810.2024.2318611
Leila Alidoust, Alireza Sharafshah, Parvaneh Keshavarz
{"title":"Haplotype-based association study of TCF7L2 gene variants with the development of diabetic retinopathy in an Iranian population.","authors":"Leila Alidoust, Alireza Sharafshah, Parvaneh Keshavarz","doi":"10.1080/13816810.2024.2318611","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Diabetic retinopathy (DR) is recognized as one of the most prevalent complications of diabetes and a major cause of morbidity. Transcription factor 7-like 2 (TCF7L2), a pivotal component in the Wnt-signaling pathway, plays a significant role in β-cell development, blood-glucose homeostasis, cell survival, cell migration, and cell proliferation. Thus, this study aimed to assess the association between TCF7L2 variants (rs7903146, rs11196205, and rs12255372) with DR in a population-based association study.</p><p><strong>Materials and methods: </strong>DNA was extracted from whole blood of all subjects by salting-out procedure. Total 524 T2DM patients including 234 T2DM individuals without DR and 290 T2DM individuals with DR were genotyped by TaqMan assay technology. Clinical characteristics of subjects were conducted to evaluate the plausible association between TCF7L2 variants and DR with univariate linear regression analysis.</p><p><strong>Results: </strong>Demographic analysis between case and control groups revealed significant differences in FBS, HbA1c, lipidemia, heart disease, and family history of T2DM (<i>p</i> < 0.05). No significant difference was observed in either genotypes distribution or allele frequency (<i>p</i> > 0.05) between T2DM individuals with and without DR in any models of inheritance. Genotype-phenotype association showed no significant association. Result of analysis indicated that HbAlc with adjusted OR of 1.8 (<i>p</i> < 0.0001) and first-degree relatives of family history with adjusted OR of 3.04 (<i>p</i> < 0.0001) were significantly associated with DR. Finally, haplotype analysis showed no noticeable association.</p><p><strong>Conclusion: </strong>In conclusion, there was no significant genetic association between rs7903146, rs11196205, and rs12255372 with DR among T2DM Iranians; however, these variants may play unknown roles in other populations.</p>","PeriodicalId":19594,"journal":{"name":"Ophthalmic Genetics","volume":null,"pages":null},"PeriodicalIF":1.2000,"publicationDate":"2024-06-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Ophthalmic Genetics","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1080/13816810.2024.2318611","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/3/21 0:00:00","PubModel":"Epub","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

Background: Diabetic retinopathy (DR) is recognized as one of the most prevalent complications of diabetes and a major cause of morbidity. Transcription factor 7-like 2 (TCF7L2), a pivotal component in the Wnt-signaling pathway, plays a significant role in β-cell development, blood-glucose homeostasis, cell survival, cell migration, and cell proliferation. Thus, this study aimed to assess the association between TCF7L2 variants (rs7903146, rs11196205, and rs12255372) with DR in a population-based association study.

Materials and methods: DNA was extracted from whole blood of all subjects by salting-out procedure. Total 524 T2DM patients including 234 T2DM individuals without DR and 290 T2DM individuals with DR were genotyped by TaqMan assay technology. Clinical characteristics of subjects were conducted to evaluate the plausible association between TCF7L2 variants and DR with univariate linear regression analysis.

Results: Demographic analysis between case and control groups revealed significant differences in FBS, HbA1c, lipidemia, heart disease, and family history of T2DM (p < 0.05). No significant difference was observed in either genotypes distribution or allele frequency (p > 0.05) between T2DM individuals with and without DR in any models of inheritance. Genotype-phenotype association showed no significant association. Result of analysis indicated that HbAlc with adjusted OR of 1.8 (p < 0.0001) and first-degree relatives of family history with adjusted OR of 3.04 (p < 0.0001) were significantly associated with DR. Finally, haplotype analysis showed no noticeable association.

Conclusion: In conclusion, there was no significant genetic association between rs7903146, rs11196205, and rs12255372 with DR among T2DM Iranians; however, these variants may play unknown roles in other populations.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
基于单倍型的伊朗人群 TCF7L2 基因变异与糖尿病视网膜病变发展的关联研究。
背景:糖尿病视网膜病变(DR)被认为是糖尿病最常见的并发症之一,也是发病的主要原因。转录因子 7-like 2(TCF7L2)是 Wnt 信号通路中的一个关键成分,在β细胞发育、血糖平衡、细胞存活、细胞迁移和细胞增殖中发挥着重要作用。因此,本研究旨在通过一项基于人群的关联研究,评估 TCF7L2 变体(rs7903146、rs11196205 和 rs12255372)与 DR 之间的关联:采用盐析法从所有受试者的全血中提取 DNA。采用 TaqMan 检测技术对 524 名 T2DM 患者进行了基因分型,其中包括 234 名无 DR 的 T2DM 患者和 290 名有 DR 的 T2DM 患者。通过单变量线性回归分析,对受试者的临床特征进行了分析,以评估TCF7L2变异与DR之间的合理关联:结果:病例组和对照组之间的人口统计学分析表明,在任何遗传模型中,有DR和无DR的T2DM患者在FBS、HbA1c、血脂、心脏病和T2DM家族史方面均存在显著差异(P P > 0.05)。基因型与表型之间没有明显关联。分析结果表明,HbAlc 的调整 OR 值为 1.8(p p 结论):总之,在 T2DM 伊朗人中,rs7903146、rs11196205 和 rs12255372 与 DR 之间没有明显的遗传关联;但是,这些变异在其他人群中可能起着未知的作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Ophthalmic Genetics
Ophthalmic Genetics 医学-眼科学
CiteScore
2.40
自引率
8.30%
发文量
126
审稿时长
>12 weeks
期刊介绍: Ophthalmic Genetics accepts original papers, review articles and short communications on the clinical and molecular genetic aspects of ocular diseases.
期刊最新文献
A novel frameshift variant in LAMP2 gene mimicking choroideremia carrier retinopathy Ophthalmic findings in Alström syndrome. BEST1 associated bestrophinopathies with angle closure and post-surgical malignant glaucoma. A novel large multi-gene deletion in syndromic choroideremia. Expanding the genotypic and phenotypic spectra with a novel variant in the ciliopathy gene, CFAP410, associated with selective cone degeneration.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1