DNA methylation of microRNA-365-1 induces apoptosis of hair follicle stem cells by targeting DAP3

IF 5.9 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Non-coding RNA Research Pub Date : 2024-03-11 DOI:10.1016/j.ncrna.2024.03.001
Xin Liu , Ruofan Xi , Xinran Du , Yi Wang , Linyan Cheng , Ge Yan , Jianyong Zhu , Te Liu , Fulun Li
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Abstract

Background

DNA methylation is a crucial epigenetic alteration involved in diverse biological processes and diseases. Nevertheless, the precise role of DNA methylation in chemotherapeutic drug-induced alopecia remains unclear. This study examined the role and novel processes of DNA methylation in regulating of chemotherapeutic drug-induced alopecia.

Methods

A mouse model of cyclophosphamide (CTX)-induced alopecia was established. Hematoxylin-eosin staining and immunohistochemical staining for the Ki67 proportion and a mitochondrial membrane potential assay (JC-1) were performed to assess the structural integrity and proliferative efficiency of the hair follicle stem cells (HFSCs). Immunofluorescence staining and real-time fluorescence quantitative PCR (RT-qPCR) were performed to determine the expression levels of key HFSC markers, namely Lgr5, CD49f, Sox9, CD200, and FZD10. Differential DNA methylation levels between the normal and CTX-induced model groups were determined through simple methylation sequencing and analyzed using bioinformatics tools. The expression levels of miR-365-1, apoptosis markers, and DAP3 were detected through RT-qPCR and western blotting. In parallel, primary mouse HFSCs were extracted and used as a cell model, which was constructed using 4-hydroperoxycyclophosphamide. The luciferase reporter gene assay was conducted to confirm miR-365-1 binding to DAP3. To measure the expression of relevant indicators, superoxide dismutase (SOD) and malondialdehyde (MDA) kits were used. Methylation-specific PCR (MS-PCR) was performed to determine DNA methylation levels. The regulatory relationship within HFSCs was confirmed through plasmid overexpression of miR-365-1 and DAP3.

Result

In the alopecia areata model, a substantial number of apoptotic cells were observed within the hair follicles on the mouse backs. Immunofluorescence staining revealed that the expression of HFSC markers significantly reduced in the CTX group. Both RT-qPCR and western blotting demonstrated a noteworthy difference in DNA methyltransferase expression. Simple methylation sequencing unveiled that DNA methylation substantially increased within the dorsal skin of the CTX group. Subsequent screening identified miR-365-1 as the most differentially expressed miRNA. miR-365-1 was predicted and confirmed to bind to the target gene DAP3. In the CTX group, SOD and ATP expression markedly reduced, whereas MDA levels were significantly elevated. Cellular investigations revealed 4-HC-induced cell cycle arrest and decreased expression of HFSC markers. MS-PCR indicated hypermethylation modification of miR-365-1 in the 4-HC-induced HFSCs. The luciferase reporter gene experiment confirmed the binding of miR-365-1 to the DAP3 promoter region. miR-365-1 overexpression dramatically reduced apoptotic protein expression in the HFSCs. However, this effect was slightly reversed after DAP3 overexpression in lentivirus.

Conclusion

This study explored the occurrence of miR-365-1 DNA methylation in chemotherapeutic drug-induced alopecia. The results unveiled that miR-365-1 reduces cell apoptosis by targeting DAP3 in HFSCs, thereby revealing the role of DNA methylation of the miR-365-1 promoter in chemotherapeutic drug-induced alopecia.

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microRNA-365-1的DNA甲基化通过靶向DAP3诱导毛囊干细胞凋亡的产生
背景DNA甲基化是一种重要的表观遗传学改变,涉及多种生物过程和疾病。然而,DNA甲基化在化疗药物诱导的脱发中的确切作用仍不清楚。本研究探讨了DNA甲基化在调节化疗药物诱导的脱发中的作用和新过程。方法建立了环磷酰胺(CTX)诱导脱发的小鼠模型,对其进行了血红素-伊红染色、Ki67比例免疫组化染色和线粒体膜电位检测(JC-1),以评估毛囊干细胞(HFSCs)的结构完整性和增殖效率。免疫荧光染色和实时荧光定量 PCR(RT-qPCR)测定了毛囊干细胞主要标志物(即 Lgr5、CD49f、Sox9、CD200 和 FZD10)的表达水平。通过简单的甲基化测序确定了正常组和CTX诱导模型组之间的DNA甲基化水平差异,并使用生物信息学工具进行了分析。通过 RT-qPCR 和 Western 印迹检测了 miR-365-1、细胞凋亡标志物和 DAP3 的表达水平。同时,还提取了小鼠原代高频间充质干细胞作为细胞模型,并使用 4-hydroperoxycyclophosphamide 对其进行构建。荧光素酶报告基因检测证实了 miR-365-1 与 DAP3 的结合。为了测量相关指标的表达,使用了超氧化物歧化酶(SOD)和丙二醛(MDA)试剂盒。甲基化特异性 PCR(MS-PCR)用于确定 DNA 甲基化水平。通过质粒过表达 miR-365-1 和 DAP3,证实了 HFSCs 内的调控关系。免疫荧光染色显示,CTX 组 HFSC 标志物的表达明显减少。RT-qPCR和Western印迹均显示DNA甲基转移酶的表达存在明显差异。简单的甲基化测序显示,CTX 组患者背部皮肤的 DNA 甲基化程度大幅提高。随后的筛选发现,miR-365-1 是表达差异最大的 miRNA。在 CTX 组中,SOD 和 ATP 表达明显降低,而 MDA 水平则显著升高。细胞研究显示,4-HC 诱导的细胞周期停滞和高频间充质干细胞标志物表达减少。MS-PCR 显示,在 4-HC 诱导的高频间充质干细胞中,miR-365-1 存在高甲基化修饰。荧光素酶报告基因实验证实了 miR-365-1 与 DAP3 启动子区域的结合。本研究探讨了 miR-365-1 DNA 甲基化在化疗药物诱导的脱发中的发生。结果显示,miR-365-1 通过靶向高频间充质干细胞中的 DAP3 减少细胞凋亡,从而揭示了 miR-365-1 启动子 DNA 甲基化在化疗药物诱导的脱发中的作用。
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来源期刊
Non-coding RNA Research
Non-coding RNA Research Medicine-Biochemistry (medical)
CiteScore
7.70
自引率
6.00%
发文量
39
审稿时长
49 days
期刊介绍: Non-coding RNA Research aims to publish high quality research and review articles on the mechanistic role of non-coding RNAs in all human diseases. This interdisciplinary journal will welcome research dealing with all aspects of non-coding RNAs-their biogenesis, regulation and role in disease progression. The focus of this journal will be to publish translational studies as well as well-designed basic studies with translational and clinical implications. The non-coding RNAs of particular interest will be microRNAs (miRNAs), small interfering RNAs (siRNAs), small nucleolar RNAs (snoRNAs), U-RNAs/small nuclear RNAs (snRNAs), exosomal/extracellular RNAs (exRNAs), Piwi-interacting RNAs (piRNAs) and long non-coding RNAs. Topics of interest will include, but not limited to: -Regulation of non-coding RNAs -Targets and regulatory functions of non-coding RNAs -Epigenetics and non-coding RNAs -Biological functions of non-coding RNAs -Non-coding RNAs as biomarkers -Non-coding RNA-based therapeutics -Prognostic value of non-coding RNAs -Pharmacological studies involving non-coding RNAs -Population based and epidemiological studies -Gene expression / proteomics / computational / pathway analysis-based studies on non-coding RNAs with functional validation -Novel strategies to manipulate non-coding RNAs expression and function -Clinical studies on evaluation of non-coding RNAs The journal will strive to disseminate cutting edge research, showcasing the ever-evolving importance of non-coding RNAs in modern day research and medicine.
期刊最新文献
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