Advancing Sustainable Solutions: Exploring United Atom Model for Efficient Molecular Dynamics Simulation of Poly-ethylene Vanillic (PEV) Polymer

Pub Date : 2024-03-29 DOI:10.12982/cmjs.2024.013
Mattanun Sangkhawasi, T. Remsungnen, Chonnikan Hanpaibool, R. P. Poo-arporn, Alisa S Vangnai, T. Rungrotmongkol
{"title":"Advancing Sustainable Solutions: Exploring United Atom Model for Efficient Molecular Dynamics Simulation of Poly-ethylene Vanillic (PEV) Polymer","authors":"Mattanun Sangkhawasi, T. Remsungnen, Chonnikan Hanpaibool, R. P. Poo-arporn, Alisa S Vangnai, T. Rungrotmongkol","doi":"10.12982/cmjs.2024.013","DOIUrl":null,"url":null,"abstract":"The development of green polymers is a crucial long-term solution to address the problem of plastic waste. In particular, the bio-based polymer polyethylene vanillic (PEV) has garnered interest due to its comparable mechanical and thermal properties to polyethylene terephthalate (PET), a widely used single-use plastic. Molecular dynamics (MD) simulations are commonly employed to study the molecular structure and dynamic properties of materials, offering cost-effective applications. However, the accuracy of MD simulation results heavily relies on the chosen force field model. The all-atom (AA) force field, while providing insights into molecular interactions, demands significant computational resources, especially for large systems like polymers. This study aimed to employ the united atom (UA) model with revised OPLS-UA force field parameters for the biopolymer PEV, aiming to reduce computational time in dynamic and physical investigations. Consequently, the UA model successfully folded the PEV polymer in a manner resembling the single-chain PEV treated with the AA model, while also predicting a glass transition temperature (Tg) close to the experimental value of 348 K. These findings underscore the potential of the UA model for simulating PEV and its promising implications.","PeriodicalId":0,"journal":{"name":"","volume":"35 17","pages":""},"PeriodicalIF":0.0,"publicationDate":"2024-03-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"","FirstCategoryId":"103","ListUrlMain":"https://doi.org/10.12982/cmjs.2024.013","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

The development of green polymers is a crucial long-term solution to address the problem of plastic waste. In particular, the bio-based polymer polyethylene vanillic (PEV) has garnered interest due to its comparable mechanical and thermal properties to polyethylene terephthalate (PET), a widely used single-use plastic. Molecular dynamics (MD) simulations are commonly employed to study the molecular structure and dynamic properties of materials, offering cost-effective applications. However, the accuracy of MD simulation results heavily relies on the chosen force field model. The all-atom (AA) force field, while providing insights into molecular interactions, demands significant computational resources, especially for large systems like polymers. This study aimed to employ the united atom (UA) model with revised OPLS-UA force field parameters for the biopolymer PEV, aiming to reduce computational time in dynamic and physical investigations. Consequently, the UA model successfully folded the PEV polymer in a manner resembling the single-chain PEV treated with the AA model, while also predicting a glass transition temperature (Tg) close to the experimental value of 348 K. These findings underscore the potential of the UA model for simulating PEV and its promising implications.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
推进可持续解决方案:探索用于高效分子动力学模拟聚乙基香草酸(PEV)聚合物的联合原子模型
开发绿色聚合物是解决塑料垃圾问题的重要长期解决方案。特别是生物基聚合物香草醛(PEV),由于其机械性能和热性能与广泛使用的一次性塑料聚对苯二甲酸乙二醇酯(PET)相当,因此引起了人们的兴趣。分子动力学(MD)模拟通常用于研究材料的分子结构和动态特性,具有成本效益。然而,分子动力学模拟结果的准确性在很大程度上取决于所选择的力场模型。全原子(AA)力场虽然可以深入了解分子间的相互作用,但需要大量的计算资源,尤其是对于聚合物等大型系统。本研究旨在针对生物聚合物 PEV 采用经修订的 OPLS-UA 力场参数的联合原子(UA)模型,以减少动态和物理研究中的计算时间。结果,UA 模型成功地折叠了 PEV 聚合物,其折叠方式与用 AA 模型处理的单链 PEV 相似,同时还预测了接近实验值 348 K 的玻璃化转变温度(Tg)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1