Epidemiological feature analysis of SVEIR model with control strategy and variant evolution

IF 8.8 3区 医学 Q1 Medicine Infectious Disease Modelling Pub Date : 2024-03-30 DOI:10.1016/j.idm.2024.03.005
Kaijing Chen , Fengying Wei , Xinyan Zhang , Hao Jin , Zuwen Wang , Yue Zuo , Kai Fan
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Abstract

The complex interactions were performed among non-pharmaceutical interventions, vaccinations, and hosts for all epidemics in mainland China during the spread of COVID-19. Specially, the small-scale epidemic in the city described by SVEIR model was less found in the current studies. The SVEIR model with control was established to analyze the dynamical and epidemiological features of two epidemics in Jinzhou City led by Omicron variants before and after Twenty Measures. In this study, the total population (N) of Jinzhou City was divided into five compartments: the susceptible (S), the vaccinated (V), the exposed (E), the infected (I), and the recovered (R). By surveillance data and the SVEIR model, three methods (maximum likelihood method, exponential growth rate method, next generation matrix method) were governed to estimate basic reproduction number, and the results showed that an increasing tendency of basic reproduction number from Omicron BA.5.2 to Omicron BA.2.12.1. Meanwhile, the effective reproduction number for two epidemics were investigated by surveillance data, and the results showed that Jinzhou wave 1 reached the peak on November 1 and was controlled 7 days later, and that Jinzhou wave 2 reached the peak on November 28 and was controlled 5 days later. Moreover, the impacts of non-pharmaceutical interventions (awareness delay, peak delay, control intensity) were discussed extensively, the variations of infection scales for Omicron variant and EG.5 variant were also discussed. Furthermore, the investigations on peaks and infection scales for two epidemics in dynamic zero-COVID policy were operated by the SVEIR model with control. The investigations on public medical requirements of Jinzhou City and Liaoning Province were analyzed by using SVEIR model without control, which provided a possible perspective on variant evolution in the future.

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带有控制策略和变异演化的 SVEIR 模型的流行病学特征分析
在 COVID-19 的传播过程中,中国大陆所有疫情的非药物干预、疫苗接种和宿主之间都存在复杂的相互作用。特别是,目前的研究中较少发现用 SVEIR 模型描述的城市小规模疫情。本研究建立了带控制的 SVEIR 模型,分析了《二十条》前后锦州市由奥米克隆变异体引发的两次疫情的动态和流行特征。本研究将锦州市总人口(N)分为易感者(S)、接种者(V)、暴露者(E)、感染者(I)和康复者(R)五部分。通过监测数据和 SVEIR 模型,采用三种方法(最大似然法、指数增长率法、下一代矩阵法)估算基本繁殖数,结果表明基本繁殖数从 Omicron BA.5.2 到 Omicron BA.2.12.1 呈上升趋势。同时,利用监测数据对两次疫情的有效繁殖数进行了调查,结果显示,锦州第 1 波疫情于 11 月 1 日达到高峰,7 天后得到控制;锦州第 2 波疫情于 11 月 28 日达到高峰,5 天后得到控制。此外,还广泛讨论了非药物干预措施(认识延迟、高峰延迟、控制强度)的影响,并讨论了 Omicron 变种和 EG.5 变种感染量表的变化。此外,通过带控制的 SVEIR 模型,对动态零 COVID 政策下两种流行病的峰值和感染规模进行了研究。利用无控制的 SVEIR 模型分析了锦州市和辽宁省的公共医疗需求调查,为未来变异体的演变提供了可能的视角。
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来源期刊
Infectious Disease Modelling
Infectious Disease Modelling Mathematics-Applied Mathematics
CiteScore
17.00
自引率
3.40%
发文量
73
审稿时长
17 weeks
期刊介绍: Infectious Disease Modelling is an open access journal that undergoes peer-review. Its main objective is to facilitate research that combines mathematical modelling, retrieval and analysis of infection disease data, and public health decision support. The journal actively encourages original research that improves this interface, as well as review articles that highlight innovative methodologies relevant to data collection, informatics, and policy making in the field of public health.
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