Chemotaxis in heterogeneous environments: A multi-agent model of decentralized gathering past obstacles

IF 2 4区 数学 Q2 BIOLOGY Journal of Theoretical Biology Pub Date : 2024-06-07 Epub Date: 2024-04-09 DOI:10.1016/j.jtbi.2024.111820
Daniele Proverbio
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Abstract

Chemotaxis, cell migration in response to chemical gradients, is known to promote self-organization of microbiological populations. However, the modeling of chemotaxis in heterogeneous environments is still limited. This study analyzes a decentralized gathering process in environments with physical as well as chemical barriers, using a multi-agent model for Disctyostelium discoideum colonies. Employing a topology-independent metric to quantify the system evolution, we study dynamical features emerging from complex social interactions. The results show that obstacles may hamper the gathering process by altering the flux of chemical signals among amoebas, acting as local topological perturbations. We also find that a minimal set of agent’s rules for robust gathering does not require explicit mechanisms for obstacle sensing and avoidance; moreover, random cell movements concur in preventing multiple stable clusters and improve the gathering efficacy. Hence, we speculate that chemotactic cells can avoid obstacles without needing specialized mechanisms: tradeoffs of social interactions and individual fluctuations are sufficient to guarantee the aggregation of the whole colony past numerous obstacles.

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异质环境中的趋化:分散聚集越过障碍物的多机器人模型
众所周知,趋化作用(细胞随化学梯度迁移)可促进微生物种群的自组织。然而,对异质环境中趋化作用的建模仍然有限。本研究利用盘状肉芽肿(Disctyostelium discoideum)菌落的多代理模型,分析了在具有物理和化学障碍的环境中的分散聚集过程。我们采用与拓扑无关的指标来量化系统演化,研究复杂社会互动中出现的动态特征。结果表明,障碍物可能会通过改变变形虫之间的化学信号通量来阻碍聚集过程,起到局部拓扑扰动的作用。我们还发现,一套用于稳健聚集的最小代理规则并不需要明确的障碍物感知和规避机制;此外,细胞的随机运动可以防止多个稳定的集群,并提高聚集效率。因此,我们推测趋化细胞不需要专门的机制就能避开障碍物:社会互动和个体波动的权衡足以保证整个集群聚集越过众多障碍物。
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来源期刊
CiteScore
4.20
自引率
5.00%
发文量
218
审稿时长
51 days
期刊介绍: The Journal of Theoretical Biology is the leading forum for theoretical perspectives that give insight into biological processes. It covers a very wide range of topics and is of interest to biologists in many areas of research, including: • Brain and Neuroscience • Cancer Growth and Treatment • Cell Biology • Developmental Biology • Ecology • Evolution • Immunology, • Infectious and non-infectious Diseases, • Mathematical, Computational, Biophysical and Statistical Modeling • Microbiology, Molecular Biology, and Biochemistry • Networks and Complex Systems • Physiology • Pharmacodynamics • Animal Behavior and Game Theory Acceptable papers are those that bear significant importance on the biology per se being presented, and not on the mathematical analysis. Papers that include some data or experimental material bearing on theory will be considered, including those that contain comparative study, statistical data analysis, mathematical proof, computer simulations, experiments, field observations, or even philosophical arguments, which are all methods to support or reject theoretical ideas. However, there should be a concerted effort to make papers intelligible to biologists in the chosen field.
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