Louise Thines, Hyunbum Jang, Zhigang Li, Samar Sayedyahossein, Ryan Maloney, Ruth Nussinov, David B. Sacks
{"title":"Disruption of Ca2+/calmodulin:KSR1 interaction lowers ERK activation","authors":"Louise Thines, Hyunbum Jang, Zhigang Li, Samar Sayedyahossein, Ryan Maloney, Ruth Nussinov, David B. Sacks","doi":"10.1002/pro.4982","DOIUrl":null,"url":null,"abstract":"KSR1, a key scaffold protein for the MAPK pathway, facilitates ERK activation upon growth factor stimulation. We recently demonstrated that KSR1 binds the Ca<jats:sup>2+</jats:sup>‐binding protein calmodulin (CaM), thereby providing an intersection between KSR1‐mediated and Ca<jats:sup>2+</jats:sup> signaling. In this study, we set out to generate a KSR1 point mutant with reduced Ca<jats:sup>2+</jats:sup>/CaM binding in order to unravel the functional implications of their interaction. To do so, we solved the structural determinants of complex formation. Using purified fragments of KSR1, we showed that Ca<jats:sup>2+</jats:sup>/CaM binds to the CA3 domain of KSR1. We then used in silico molecular modeling to predict contact residues for binding. This approach identified two possible modes of interaction: (1) binding of extended Ca<jats:sup>2+</jats:sup>/CaM to a globular conformation of KSR1‐CA3 via electrostatic interactions or (2) binding of collapsed Ca<jats:sup>2+</jats:sup>/CaM to α‐helical KSR1‐CA3 via hydrophobic interactions. Experimentally, site‐directed mutagenesis of the predicted contact residues for the two binding models favored that where collapsed Ca<jats:sup>2+</jats:sup>/CaM binds to the α‐helical conformation of KSR1‐CA3. Importantly, replacing KSR1‐Phe<jats:sup>355</jats:sup> with Asp reduces Ca<jats:sup>2+</jats:sup>/CaM binding by 76%. The KSR1‐F<jats:sup>355</jats:sup>D mutation also significantly impairs the ability of EGF to activate ERK, which reveals that Ca<jats:sup>2+</jats:sup>/CaM binding promotes KSR1‐mediated MAPK signaling. This work, by uncovering structural insight into the binding of KSR1 to Ca<jats:sup>2+</jats:sup>/CaM, identifies a KSR1 single‐point mutant as a bioreagent to selectively study the crosstalk between Ca<jats:sup>2+</jats:sup> and KSR1‐mediated signaling.","PeriodicalId":20761,"journal":{"name":"Protein Science","volume":null,"pages":null},"PeriodicalIF":4.5000,"publicationDate":"2024-04-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Protein Science","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1002/pro.4982","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
KSR1, a key scaffold protein for the MAPK pathway, facilitates ERK activation upon growth factor stimulation. We recently demonstrated that KSR1 binds the Ca2+‐binding protein calmodulin (CaM), thereby providing an intersection between KSR1‐mediated and Ca2+ signaling. In this study, we set out to generate a KSR1 point mutant with reduced Ca2+/CaM binding in order to unravel the functional implications of their interaction. To do so, we solved the structural determinants of complex formation. Using purified fragments of KSR1, we showed that Ca2+/CaM binds to the CA3 domain of KSR1. We then used in silico molecular modeling to predict contact residues for binding. This approach identified two possible modes of interaction: (1) binding of extended Ca2+/CaM to a globular conformation of KSR1‐CA3 via electrostatic interactions or (2) binding of collapsed Ca2+/CaM to α‐helical KSR1‐CA3 via hydrophobic interactions. Experimentally, site‐directed mutagenesis of the predicted contact residues for the two binding models favored that where collapsed Ca2+/CaM binds to the α‐helical conformation of KSR1‐CA3. Importantly, replacing KSR1‐Phe355 with Asp reduces Ca2+/CaM binding by 76%. The KSR1‐F355D mutation also significantly impairs the ability of EGF to activate ERK, which reveals that Ca2+/CaM binding promotes KSR1‐mediated MAPK signaling. This work, by uncovering structural insight into the binding of KSR1 to Ca2+/CaM, identifies a KSR1 single‐point mutant as a bioreagent to selectively study the crosstalk between Ca2+ and KSR1‐mediated signaling.
期刊介绍:
Protein Science, the flagship journal of The Protein Society, is a publication that focuses on advancing fundamental knowledge in the field of protein molecules. The journal welcomes original reports and review articles that contribute to our understanding of protein function, structure, folding, design, and evolution.
Additionally, Protein Science encourages papers that explore the applications of protein science in various areas such as therapeutics, protein-based biomaterials, bionanotechnology, synthetic biology, and bioelectronics.
The journal accepts manuscript submissions in any suitable format for review, with the requirement of converting the manuscript to journal-style format only upon acceptance for publication.
Protein Science is indexed and abstracted in numerous databases, including the Agricultural & Environmental Science Database (ProQuest), Biological Science Database (ProQuest), CAS: Chemical Abstracts Service (ACS), Embase (Elsevier), Health & Medical Collection (ProQuest), Health Research Premium Collection (ProQuest), Materials Science & Engineering Database (ProQuest), MEDLINE/PubMed (NLM), Natural Science Collection (ProQuest), and SciTech Premium Collection (ProQuest).