Fusing Diverse Decision Rules in 3D-Radiomics for Assisting Diagnosis of Lung Adenocarcinoma

IF 2.9 2区 工程技术 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Journal of Digital Imaging Pub Date : 2024-04-02 DOI:10.1007/s10278-024-00967-5
He Ren, Qiubo Wang, Zhengguang Xiao, Runwei Mo, Jiachen Guo, Gareth Richard Hide, Mengting Tu, Yanan Zeng, Chen Ling, Ping Li
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Abstract

This study aimed to develop an interpretable diagnostic model for subtyping of pulmonary adenocarcinoma, including minimally invasive adenocarcinoma (MIA), adenocarcinoma in situ (AIS), and invasive adenocarcinoma (IAC), by integrating 3D-radiomic features and clinical data. Data from multiple hospitals were collected, and 10 key features were selected from 1600 3D radiomic signatures and 11 radiological features. Diverse decision rules were extracted using ensemble learning methods (gradient boosting, random forest, and AdaBoost), fused, ranked, and selected via RuleFit and SHAP to construct a rule-based diagnostic model. The model’s performance was evaluated using AUC, precision, accuracy, recall, and F1-score and compared with other models. The rule-based diagnostic model exhibited excellent performance in the training, testing, and validation cohorts, with AUC values of 0.9621, 0.9529, and 0.8953, respectively. This model outperformed counterparts relying solely on selected features and previous research models. Specifically, the AUC values for the previous research models in the three cohorts were 0.851, 0.893, and 0.836. It is noteworthy that individual models employing GBDT, random forest, and AdaBoost demonstrated AUC values of 0.9391, 0.8681, and 0.9449 in the training cohort, 0.9093, 0.8722, and 0.9363 in the testing cohort, and 0.8440, 0.8640, and 0.8750 in the validation cohort, respectively. These results highlight the superiority of the rule-based diagnostic model in the assessment of lung adenocarcinoma subtypes, while also providing insights into the performance of individual models. Integrating diverse decision rules enhanced the accuracy and interpretability of the diagnostic model for lung adenocarcinoma subtypes. This approach bridges the gap between complex predictive models and clinical utility, offering valuable support to healthcare professionals and patients.

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融合三维放射组学中的多种决策规则辅助诊断肺腺癌
本研究旨在通过整合三维放射学特征和临床数据,建立一个可解释的肺腺癌亚型诊断模型,包括微侵袭性腺癌(MIA)、原位腺癌(AIS)和侵袭性腺癌(IAC)。该研究收集了多家医院的数据,并从 1600 个三维放射学特征和 11 个放射学特征中筛选出 10 个关键特征。利用集合学习方法(梯度提升、随机森林和 AdaBoost)提取了多种决策规则,并通过 RuleFit 和 SHAP 进行融合、排序和筛选,从而构建了基于规则的诊断模型。该模型的性能使用 AUC、精确度、准确度、召回率和 F1 分数进行评估,并与其他模型进行比较。基于规则的诊断模型在训练、测试和验证队列中均表现出色,AUC 值分别为 0.9621、0.9529 和 0.8953。该模型的表现优于仅依靠选定特征的模型和以前的研究模型。具体来说,三个队列中以往研究模型的 AUC 值分别为 0.851、0.893 和 0.836。值得注意的是,采用 GBDT、随机森林和 AdaBoost 的单个模型在训练队列中的 AUC 值分别为 0.9391、0.8681 和 0.9449,在测试队列中的 AUC 值分别为 0.9093、0.8722 和 0.9363,在验证队列中的 AUC 值分别为 0.8440、0.8640 和 0.8750。这些结果凸显了基于规则的诊断模型在评估肺腺癌亚型方面的优越性,同时也为了解单个模型的性能提供了启示。整合不同的决策规则提高了肺腺癌亚型诊断模型的准确性和可解释性。这种方法在复杂的预测模型和临床实用性之间架起了一座桥梁,为医护人员和患者提供了宝贵的支持。
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来源期刊
Journal of Digital Imaging
Journal of Digital Imaging 医学-核医学
CiteScore
7.50
自引率
6.80%
发文量
192
审稿时长
6-12 weeks
期刊介绍: The Journal of Digital Imaging (JDI) is the official peer-reviewed journal of the Society for Imaging Informatics in Medicine (SIIM). JDI’s goal is to enhance the exchange of knowledge encompassed by the general topic of Imaging Informatics in Medicine such as research and practice in clinical, engineering, and information technologies and techniques in all medical imaging environments. JDI topics are of interest to researchers, developers, educators, physicians, and imaging informatics professionals. Suggested Topics PACS and component systems; imaging informatics for the enterprise; image-enabled electronic medical records; RIS and HIS; digital image acquisition; image processing; image data compression; 3D, visualization, and multimedia; speech recognition; computer-aided diagnosis; facilities design; imaging vocabularies and ontologies; Transforming the Radiological Interpretation Process (TRIP™); DICOM and other standards; workflow and process modeling and simulation; quality assurance; archive integrity and security; teleradiology; digital mammography; and radiological informatics education.
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