First application of one-class support vector machine algorithms for detecting abnormal behavior of marine medaka Oryzias javanicus exposed to the harmful alga Karenia mikimotoi
{"title":"First application of one-class support vector machine algorithms for detecting abnormal behavior of marine medaka Oryzias javanicus exposed to the harmful alga Karenia mikimotoi","authors":"Abrianna Elke Chairil, Yuki Takai, Yosuke Koba, Shinya Kijimoto, Yukinari Tsuruda, Ik-Joon Kang, Yuji Oshima, Yohei Shimasaki","doi":"10.1002/lom3.10613","DOIUrl":null,"url":null,"abstract":"<p>It is empirically known that fish exposed to harmful algal blooms (HABs) exhibit abnormal behavior. This might serve as a method for early detection of HABs. There has been no report of the detection of behavioral abnormalities of fish exposed to harmful algae using machine learning. In this study, the behavior of <i>Oryzias javanicus</i> (Java medaka) exposed in a stepwise manner to the HAB species <i>Karenia mikimotoi</i> at densities of 0 cells mL<sup>−1</sup> (control), 1 × 10<sup>3</sup> cells mL<sup>−1</sup> (nonlethal), and 5 × 10<sup>3</sup> cells mL<sup>−1</sup> (sublethal) was recorded for 30 min at each cell density using two digital cameras connected to a software that tracked behavioral metrics of fish. The level of anomaly in the behavior of Java medaka was then analyzed using one-class support vector machines (OC-SVM) to determine whether the behavioral changes could be considered abnormal. The results revealed abnormal swimming behavior evidenced by an increase of swimming speed, a decrease of shoaling behavior, and a greater depth of swimming in Java medaka exposed especially to the sublethal <i>K</i>. <i>mikimotoi</i> density. The medaka exposed to <i>K</i>. <i>mikimotoi</i> also displayed physical deformities of their gills that were thought to have caused their abnormal behavior. This supposition was confirmed by further analysis using OC-SVM because the behavior of groups exposed to nonlethal and sublethal densities of <i>K</i>. <i>mikimotoi</i> were considered abnormal compared with that of the control groups. The results of this study show the possibility of using this system for early and real-time detection of HABs.</p>","PeriodicalId":18145,"journal":{"name":"Limnology and Oceanography: Methods","volume":"22 6","pages":"388-398"},"PeriodicalIF":2.1000,"publicationDate":"2024-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/lom3.10613","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Limnology and Oceanography: Methods","FirstCategoryId":"89","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/lom3.10613","RegionNum":3,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"LIMNOLOGY","Score":null,"Total":0}
引用次数: 0
Abstract
It is empirically known that fish exposed to harmful algal blooms (HABs) exhibit abnormal behavior. This might serve as a method for early detection of HABs. There has been no report of the detection of behavioral abnormalities of fish exposed to harmful algae using machine learning. In this study, the behavior of Oryzias javanicus (Java medaka) exposed in a stepwise manner to the HAB species Karenia mikimotoi at densities of 0 cells mL−1 (control), 1 × 103 cells mL−1 (nonlethal), and 5 × 103 cells mL−1 (sublethal) was recorded for 30 min at each cell density using two digital cameras connected to a software that tracked behavioral metrics of fish. The level of anomaly in the behavior of Java medaka was then analyzed using one-class support vector machines (OC-SVM) to determine whether the behavioral changes could be considered abnormal. The results revealed abnormal swimming behavior evidenced by an increase of swimming speed, a decrease of shoaling behavior, and a greater depth of swimming in Java medaka exposed especially to the sublethal K. mikimotoi density. The medaka exposed to K. mikimotoi also displayed physical deformities of their gills that were thought to have caused their abnormal behavior. This supposition was confirmed by further analysis using OC-SVM because the behavior of groups exposed to nonlethal and sublethal densities of K. mikimotoi were considered abnormal compared with that of the control groups. The results of this study show the possibility of using this system for early and real-time detection of HABs.
期刊介绍:
Limnology and Oceanography: Methods (ISSN 1541-5856) is a companion to ASLO''s top-rated journal Limnology and Oceanography, and articles are held to the same high standards. In order to provide the most rapid publication consistent with high standards, Limnology and Oceanography: Methods appears in electronic format only, and the entire submission and review system is online. Articles are posted as soon as they are accepted and formatted for publication.
Limnology and Oceanography: Methods will consider manuscripts whose primary focus is methodological, and that deal with problems in the aquatic sciences. Manuscripts may present new measurement equipment, techniques for analyzing observations or samples, methods for understanding and interpreting information, analyses of metadata to examine the effectiveness of approaches, invited and contributed reviews and syntheses, and techniques for communicating and teaching in the aquatic sciences.