RNA-sequencing exploration on SIR2 and SOD genes in Polyalthia longifolia leaf methanolic extracts (PLME) mediated anti-aging effects in Saccharomyces cerevisiae BY611 yeast cells

IF 4.4 4区 医学 Q1 GERIATRICS & GERONTOLOGY Biogerontology Pub Date : 2024-04-15 DOI:10.1007/s10522-024-10104-y
Manisekaran Hemagirri, Yeng Chen, Subash C. B. Gopinath, Mohd Adnan, Mitesh Patel, Sreenivasan Sasidharan
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Abstract

Polyalthia longifolia is well-known for its abundance of polyphenol content and traditional medicinal uses. Previous research has demonstrated that the methanolic extract of P. longifolia leaves (PLME, 1 mg/mL) possesses anti-aging properties in Saccharomyces cerevisiae BY611 yeast cells. Building on these findings, this study delves deeper into the potential antiaging mechanism of PLME, by analyzing the transcriptional responses of BY611 cells treated with PLME using RNA-sequencing (RNA-seq) technology. The RNA-seq analysis results identified 1691 significantly (padj < 0.05) differentially expressed genes, with 947 upregulated and 744 downregulated genes. Notably, the expression of three important aging-related genes, SIR2, SOD1, and SOD2, showed a significant difference following PLME treatment. The subsequent integration of these targeted genes with GO and KEGG pathway analysis revealed the multifaceted nature of PLME’s anti-aging effects in BY611 yeast cells. Enriched GO and KEGG analysis showed that PLME treatment promotes the upregulation of SIR2, SOD1, and SOD2 genes, leading to a boosted cellular antioxidant defense system, reduced oxidative stress, regulated cell metabolism, and maintain genome stability. These collectively increased longevities in PLME-treated BY611 yeast cells and indicate the potential anti-aging action of PLME through the modulation of SIR2 and SOD genes. The present study provided novel insights into the roles of SIR2, SOD1, and SOD2 genes in the anti-aging effects of PLME treatment, offering promising interventions for promoting healthy aging.

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RNA 序列分析探究长叶聚伞花科植物叶甲醇提取物(PLME)介导的 BY611 酵母菌细胞抗衰老效应中的 SIR2 和 SOD 基因
长叶女贞(Polyalthia longifolia)以其丰富的多酚含量和传统药用价值而闻名。先前的研究表明,长叶灰树叶的甲醇提取物(PLME,1 毫克/毫升)在酿酒酵母 BY611 酵母菌细胞中具有抗衰老特性。在这些发现的基础上,本研究利用RNA测序(RNA-seq)技术分析了经PLME处理的BY611细胞的转录反应,从而深入探讨了PLME潜在的抗衰老机制。RNA-seq分析结果发现了1691个差异表达基因(padj <0.05),其中上调基因947个,下调基因744个。值得注意的是,三个与衰老相关的重要基因 SIR2、SOD1 和 SOD2 的表达在 PLME 处理后出现了明显差异。随后将这些目标基因与GO和KEGG通路分析相结合,发现了PLME在BY611酵母细胞中抗衰老作用的多面性。丰富的GO和KEGG分析表明,PLME能促进SIR2、SOD1和SOD2基因的上调,从而增强细胞的抗氧化防御系统,减少氧化应激,调节细胞代谢,并保持基因组的稳定性。这些因素共同提高了经PLME处理的BY611酵母细胞的寿命,表明PLME通过调节SIR2和SOD基因具有潜在的抗衰老作用。本研究就SIR2、SOD1和SOD2基因在PLME抗衰老作用中的作用提供了新的见解,为促进健康老龄化提供了有前景的干预措施。
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来源期刊
Biogerontology
Biogerontology 医学-老年医学
CiteScore
8.00
自引率
4.40%
发文量
54
审稿时长
>12 weeks
期刊介绍: The journal Biogerontology offers a platform for research which aims primarily at achieving healthy old age accompanied by improved longevity. The focus is on efforts to understand, prevent, cure or minimize age-related impairments. Biogerontology provides a peer-reviewed forum for publishing original research data, new ideas and discussions on modulating the aging process by physical, chemical and biological means, including transgenic and knockout organisms; cell culture systems to develop new approaches and health care products for maintaining or recovering the lost biochemical functions; immunology, autoimmunity and infection in aging; vertebrates, invertebrates, micro-organisms and plants for experimental studies on genetic determinants of aging and longevity; biodemography and theoretical models linking aging and survival kinetics.
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