Bipolar Action of Inhibitor of Vasculogenic Mimicry on Gene Expression in Melanoma Cells

IF 1.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Biology Pub Date : 2024-04-09 DOI:10.1134/s0026893324020055
N. A. Tchurikov, A. A. Vartanian, E. S. Klushevskaya, I. R. Alembekov, A. N. Kretova, V. R. Chechetkin, G. I. Kravatskaya, V. S. Kosorukov, Y. V. Kravatsky
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Abstract—Multiple exogenous or endogenous factors alter gene expression patterns by different mechanisms that are poorly understood. We used RNA-Seq analysis in order to study changes in gene expression in melanoma cells that are capable of vasculogenic mimicry that is inhibited upon the action of an inhibitor of vasculogenic mimicry. Here, we show that the drug induces a strong upregulation of 50 genes that control the cell cycle and microtubule cytoskeleton coupled with a strong downregulation of 50 genes that control different cellular metabolic processes. We found that both groups of genes are simultaneously regulated by multiple sets of transcription factors. We conclude that one way for coordinated regulation of large groups of genes is regulation simultaneously by multiple transcription factors.

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血管生成模拟抑制剂对黑色素瘤细胞基因表达的双极作用
摘要-多种外源性或内源性因素通过不同的机制改变基因表达模式,而这些机制尚不十分清楚。我们使用 RNA-Seq 分析方法研究了黑色素瘤细胞中基因表达的变化,这些细胞能够进行血管生成模拟,而血管生成模拟抑制剂的作用抑制了这种模拟。在这里,我们发现这种药物会诱导 50 个控制细胞周期和微管细胞骨架的基因强烈上调,同时也会诱导 50 个控制不同细胞代谢过程的基因强烈下调。我们发现,这两组基因同时受到多组转录因子的调控。我们的结论是,协调调控大型基因组的一种方法是同时受到多个转录因子的调控。
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来源期刊
Molecular Biology
Molecular Biology 生物-生化与分子生物学
CiteScore
1.30
自引率
8.30%
发文量
78
审稿时长
3 months
期刊介绍: Molecular Biology is an international peer reviewed journal that covers a wide scope of problems in molecular, cell and computational biology including genomics, proteomics, bioinformatics, molecular virology and immunology, molecular development biology, molecular evolution and related areals. Molecular Biology publishes reviews, experimental and theoretical works. Every year, the journal publishes special issues devoted to most rapidly developing branches of physical-chemical biology and to the most outstanding scientists.
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