Integrated grade-wise profiling analysis reveals potential plasma miR-373-3p as prognostic indicator in Prostate Cancer & its target KPNA2

IF 5.9 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Non-coding RNA Research Pub Date : 2024-04-19 DOI:10.1016/j.ncrna.2024.04.004
Mohd Mabood Khan , Vineeta Sharma , Mohammad Serajuddin , Annet Kirabo
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Abstract

Background

Plasma microRNAs (miRNAs) have recently garnered attention for their potential as stable biomarkers in the context of Prostate Cancer (PCa), demonstrating established associations with tumor grade, biochemical recurrence (BCR), and metastasis. This study seeks to assess the utility of plasma miRNAs as prognostic indicators for distinguishing between high-grade and low-grade PCa, and to explore their involvement in PCa pathogenesis.

Methodology

We conducted miRNA profiling in both plasma and tissue specimens from patients with varying PCa grades. Subsequently, the identified miRNAs were validated in a substantial independent PCa cohort. Furthermore, we identified and confirmed the gene targets of these selected miRNAs through Western blot analysis.

Results

In our plasma profiling investigation, we identified 98, 132, and 154 differentially expressed miRNAs (DEMs) in high-grade PCa vs. benign prostatic hyperplasia (BPH), low-grade PCa vs. BPH, and high-grade PCa vs. low-grade PCa, respectively. Our tissue profiling study revealed 111, 132, and 257 statistically significant DEMs for the same comparisons. Notably, miR-373-3p emerged as the sole consistently dysregulated miRNA in both plasma and tissue samples of PCa. This miRNA displayed significant overexpression in plasma and tissue samples, with fold changes of 3.584 ± 0.5638 and 8.796 ± 1.245, respectively. Furthermore, we observed a significant reduction in KPNA2 protein expression in PCa.

Conclusion

Our findings lend support to the potential of plasma miR-373-3p as a valuable biomarker for predicting and diagnosing PCa. Additionally, this miRNA may contribute to the progression of PCa by inhibiting KPNA2 expression, shedding light on its role in the disease.

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综合分级分析揭示血浆 miR-373-3p 作为前列腺癌预后指标的潜力及其靶标 KPNA2
背景血浆微RNA(miRNA)最近因其作为前列腺癌(PCa)稳定生物标志物的潜力而备受关注,它们与肿瘤分级、生化复发(BCR)和转移之间的关系已得到证实。本研究旨在评估血浆miRNA作为区分高级别和低级别PCa的预后指标的效用,并探讨它们在PCa发病机制中的参与情况。方法我们对不同级别PCa患者的血浆和组织标本进行了miRNA图谱分析。随后,我们在大量独立的 PCa 患者队列中验证了所发现的 miRNA。此外,我们还通过 Western 印迹分析确定并证实了所选 miRNAs 的基因靶标。结果 在血浆分析调查中,我们分别在高级别 PCa 与良性前列腺增生症(BPH)、低级别 PCa 与良性前列腺增生症、高级别 PCa 与低级别 PCa 中发现了 98、132 和 154 个差异表达的 miRNAs (DEMs)。我们的组织图谱研究发现,在相同的比较中,分别有 111、132 和 257 个具有统计学意义的 DEMs。值得注意的是,miR-373-3p 是 PCa 血浆和组织样本中唯一持续失调的 miRNA。该 miRNA 在血浆和组织样本中都出现了明显的过表达,其变化倍数分别为 3.584 ± 0.5638 和 8.796 ± 1.245。此外,我们还观察到 PCa 中 KPNA2 蛋白表达明显减少。此外,这种 miRNA 可能会通过抑制 KPNA2 的表达来促进 PCa 的进展,从而揭示它在该疾病中的作用。
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来源期刊
Non-coding RNA Research
Non-coding RNA Research Medicine-Biochemistry (medical)
CiteScore
7.70
自引率
6.00%
发文量
39
审稿时长
49 days
期刊介绍: Non-coding RNA Research aims to publish high quality research and review articles on the mechanistic role of non-coding RNAs in all human diseases. This interdisciplinary journal will welcome research dealing with all aspects of non-coding RNAs-their biogenesis, regulation and role in disease progression. The focus of this journal will be to publish translational studies as well as well-designed basic studies with translational and clinical implications. The non-coding RNAs of particular interest will be microRNAs (miRNAs), small interfering RNAs (siRNAs), small nucleolar RNAs (snoRNAs), U-RNAs/small nuclear RNAs (snRNAs), exosomal/extracellular RNAs (exRNAs), Piwi-interacting RNAs (piRNAs) and long non-coding RNAs. Topics of interest will include, but not limited to: -Regulation of non-coding RNAs -Targets and regulatory functions of non-coding RNAs -Epigenetics and non-coding RNAs -Biological functions of non-coding RNAs -Non-coding RNAs as biomarkers -Non-coding RNA-based therapeutics -Prognostic value of non-coding RNAs -Pharmacological studies involving non-coding RNAs -Population based and epidemiological studies -Gene expression / proteomics / computational / pathway analysis-based studies on non-coding RNAs with functional validation -Novel strategies to manipulate non-coding RNAs expression and function -Clinical studies on evaluation of non-coding RNAs The journal will strive to disseminate cutting edge research, showcasing the ever-evolving importance of non-coding RNAs in modern day research and medicine.
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