GeNepher data- and biobank for patients with (suspected) genetic kidney disease: Rationale, design and status update

Rare Pub Date : 2024-01-01 DOI:10.1016/j.rare.2024.100030
Laura R. Claus , Iris Lekkerkerker , Bert van der Zwaag , Tri Q. Nguyen , Nine V.A.M. Knoers , Martin H. de Borst , Group authorship GeNepher Biobank Contributors, Maarten B. Rookmaker , Marc R. Lilien , Albertien M. van Eerde
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引用次数: 0

Abstract

Background

Clinical research on monogenic kidney disease (MKD) is thriving and the need for large cohorts, prospective data collection and biobanking is increasing. We aim to create a sustainable large MKD biobank with a vast amount of uniformly collected high-quality data that is readily available for future research, with an infrastructure that allows for recontacting participants.

Methods

The GeNepher data- and biobank is an ongoing data- and sample collection that includes patients and family members with known and/or suspected MKD. With a tiered approach participants can give broad consent for including their 1) available medical data (including genetic testing results), 2) inclusion of massively parallel sequencing data for add-on analysis, and 3) additional biobank sampling (e.g. urine for tubuloids, skin biopsy for fibroblasts). Recontacting is possible for additional data collection, novel research opportunities and return of relevant findings.

Discussion

The GeNepher data- and biobank collects prospective and retrospective data from kidney disease patients and their relatives. The broad consent allows for research that extends beyond one specific research question. Herewith, this biobank aims to 1) increase the scientific knowledge based on disease mechanisms including (novel) monogenic causes, 2) study modifiers, 3) improve care, including reproduction related research questions. Furthermore, it facilitates recontacting for opportunities in treatment development or when diagnose specific trials are started or specific treatment is approved.

Conclusion

The GeNepher biobank is designed to support a wide range of research projects by providing access to a diverse population of patients with (suspected) MKD and has the potential to make a significant contribution to the field of rare kidney disease research.

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针对(疑似)遗传性肾病患者的 GeNepher 数据库和生物库:原理、设计和最新情况
背景有关单基因肾病(MKD)的临床研究正在蓬勃发展,对大型队列、前瞻性数据收集和生物库的需求与日俱增。我们的目标是建立一个可持续发展的大型 MKD 生物库,该生物库拥有大量统一收集的高质量数据,可随时用于未来研究,其基础设施允许重新联系参与者。通过分层方法,参与者可广泛同意将他们的 1) 可用医疗数据(包括基因检测结果)、2) 大规模平行测序数据纳入其中进行附加分析,以及 3) 额外的生物库采样(如尿液中的管状细胞、皮肤活检中的成纤维细胞)纳入其中。讨论 GeNepher 数据和生物库收集肾病患者及其亲属的前瞻性和回顾性数据。在获得广泛同意的情况下,可以进行超出特定研究问题范围的研究。因此,该生物库旨在:1)增加基于疾病机制的科学知识,包括(新的)单基因病因;2)研究改变因素;3)改善护理,包括与生殖相关的研究问题。结论 GeNepher 生物库旨在通过提供对不同的 MKD(疑似)患者群体的访问,支持广泛的研究项目,并有可能为罕见肾病研究领域做出重大贡献。
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