Assessment of Stiffness-Dependent Autophagosome Formation and Apoptosis in Embryonal Rhabdomyosarcoma Tumor Cells.

Q4 Biochemistry, Genetics and Molecular Biology Methods in molecular biology Pub Date : 2024-04-23 DOI:10.1007/7651_2024_538
Serap Sezen, Sevin Adiguzel, Atefeh Zarepour, Arezoo Khosravi, Joseph W Gordon, Saeid Ghavami, Ali Zarrabi
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引用次数: 0

Abstract

Remodeling of the extracellular matrix (ECM) eventually causes the stiffening of tumors and changes to the microenvironment. The stiffening alters the biological processes in cancer cells due to altered signaling through cell surface receptors. Autophagy, a key catabolic process in normal and cancer cells, is thought to be involved in mechano-transduction and the level of autophagy is probably stiffness-dependent. Here, we provide a methodology to study the effect of matrix stiffness on autophagy in embryonal rhabdomyosarcoma cells. To mimic stiffness, we seeded cells on GelMA hydrogel matrices with defined stiffness and evaluated autophagy-related endpoints. We also evaluated autophagy-dependent pathways, apoptosis, and cell viability. Specifically, we utilized immunocytochemistry and confocal microscopy to track autophagosome formation through LC3 lipidation. This approach suggests that the use of GelMA hydrogels with defined stiffness represents a novel method to evaluate the role of autophagy in embryonal rhabdomyosarcoma and other cancer cells.

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评估胚胎横纹肌肉瘤肿瘤细胞中自噬体的形成和凋亡对硬度的依赖性
细胞外基质(ECM)的重塑最终会导致肿瘤变硬和微环境的改变。由于通过细胞表面受体发出的信号发生了改变,僵化改变了癌细胞的生物过程。自噬是正常细胞和癌细胞中的一个关键分解过程,被认为参与了机械传导,而自噬的水平可能取决于僵化程度。在这里,我们提供了一种方法来研究基质硬度对胚胎横纹肌肉瘤细胞自噬的影响。为了模拟硬度,我们将细胞播种在具有确定硬度的 GelMA 水凝胶基质上,并评估自噬相关终点。我们还评估了依赖自噬的途径、细胞凋亡和细胞存活率。具体来说,我们利用免疫细胞化学和共聚焦显微镜追踪通过 LC3 脂化形成的自噬体。这种方法表明,使用具有特定硬度的 GelMA 水凝胶是评估胚胎横纹肌肉瘤和其他癌细胞自噬作用的一种新方法。
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来源期刊
Methods in molecular biology
Methods in molecular biology Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
2.00
自引率
0.00%
发文量
3536
期刊介绍: For over 20 years, biological scientists have come to rely on the research protocols and methodologies in the critically acclaimed Methods in Molecular Biology series. The series was the first to introduce the step-by-step protocols approach that has become the standard in all biomedical protocol publishing. Each protocol is provided in readily-reproducible step-by-step fashion, opening with an introductory overview, a list of the materials and reagents needed to complete the experiment, and followed by a detailed procedure that is supported with a helpful notes section offering tips and tricks of the trade as well as troubleshooting advice.
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