CircSSBP2 acts as a MiR-2400 sponge to promote intramuscular preadipocyte proliferation by regulating NDRG1.

IF 2.3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Molecular Genetics and Genomics Pub Date : 2024-05-03 DOI:10.1007/s00438-024-02138-1
Yanqing Zhao, Wenzhen Zhang, Sayed Haidar Abbas Raza, Xiaopeng Qu, Zhimei Yang, Jiahan Deng, Jing Ma, Bandar Hamad Aloufi, Juze Wang, Linsen Zan
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Abstract

Intramuscular fat (IMF) is a critical factor in beef quality. IMF is mainly distributed between muscle fibres and its accumulation can affect the marbling and meat quality of beef. IMF formation and deposition is a complex process and in recent years a group of non-coding RNAs (ncRNAs), known as circRNAs, have been discovered to play an important role in regulating intramuscular fat deposition. CircRNAs form a covalent loop structure after reverse splicing of precursor mRNAs. They can act by adsorbing miRNAs, thereby reducing their repressive effects on downstream target genes. Based on high-throughput sequencing of circRNAs in intramuscular fat of Qinchuan and Japanese black cattle, we identified a novel circSSBP2 that is differentially expressed between the two species and associated with adipogenesis. We show that circSSBP2 knockdown promotes bovine intramuscular preadipocyte proliferation, whereas overexpression inhibits bovine intramuscular preadipocyte proliferation. We also show that circSSBP2 can act as a molecular sponge for miR-2400 and that miR-2400 overexpression promotes bovine intramuscular preadipocyte proliferation. Furthermore, N-myc downstream-regulated gene 1 (NDRG1) was identified as a direct target gene of miR-2400, and NDRG1 interference promoted the proliferation of bovine intramuscular preadipocytes. In conclusion, our results suggest that circSSBP2 inhibits the proliferation of bovine intramuscular preadipocytes by regulating the miR-2400/NDRG1 axis.

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CircSSBP2 作为 MiR-2400 的海绵,通过调节 NDRG1 促进肌肉内前脂肪细胞增殖。
肌内脂肪(IMF)是影响牛肉质量的关键因素。肌内脂肪主要分布在肌肉纤维之间,它的积累会影响牛肉的大理石纹和肉质。肌内脂肪的形成和沉积是一个复杂的过程,近年来发现一组非编码 RNA(ncRNA),即 circRNA,在调节肌内脂肪沉积方面发挥着重要作用。circRNA 在前体 mRNA 反向剪接后形成共价环结构。它们可以吸附 miRNA,从而降低其对下游靶基因的抑制作用。基于对秦川牛和日本黑牛肌内脂肪中 circRNAs 的高通量测序,我们发现了一种新的 circSSBP2,它在两种牛之间有差异表达,并与脂肪生成有关。我们发现,circSSBP2 基因敲除可促进牛肌内前脂肪细胞的增殖,而过表达则会抑制牛肌内前脂肪细胞的增殖。我们还发现,circSSBP2 可作为 miR-2400 的分子海绵,过表达 miR-2400 可促进牛肌内前脂肪细胞增殖。此外,N-myc下游调控基因1(NDRG1)被鉴定为miR-2400的直接靶基因,干扰NDRG1可促进牛肌内前脂肪细胞的增殖。总之,我们的研究结果表明,circSSBP2通过调节miR-2400/NDRG1轴抑制牛肌内前脂肪细胞的增殖。
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来源期刊
Molecular Genetics and Genomics
Molecular Genetics and Genomics 生物-生化与分子生物学
CiteScore
5.10
自引率
3.20%
发文量
134
审稿时长
1 months
期刊介绍: Molecular Genetics and Genomics (MGG) publishes peer-reviewed articles covering all areas of genetics and genomics. Any approach to the study of genes and genomes is considered, be it experimental, theoretical or synthetic. MGG publishes research on all organisms that is of broad interest to those working in the fields of genetics, genomics, biology, medicine and biotechnology. The journal investigates a broad range of topics, including these from recent issues: mechanisms for extending longevity in a variety of organisms; screening of yeast metal homeostasis genes involved in mitochondrial functions; molecular mapping of cultivar-specific avirulence genes in the rice blast fungus and more.
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