A comprehensive in silico analysis of putative outer membrane and secretory hydrolases from the pathogenic Leptospira: Possible implications in pathogenesis

IF 3.2 4区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Biotechnology and applied biochemistry Pub Date : 2024-05-10 DOI:10.1002/bab.2596
Umate Nachiket Shankar, Mohd. Shiraz, Pankaj Kumar, Mohd. Akif
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Abstract

Outer surface/membrane and virulent secretory proteins are primarily crucial for pathogenesis. Secreted and outer membrane hydrolases of many pathogens play an important role in attenuating the host immune system. Leptospira expresses many such proteins, and few have been characterized to display various roles, including host immune evasion. However, identification, classification, characterization, and elucidation of the possible role of Leptospira’s outer membrane and secretory hydrolases have yet to be explored. In the present study, we used bioinformatics tools to predict exported proteins from the pathogenic Leptospira proteome. Moreover, we focused on secretory and outer membrane putative hydrolases from the exported proteins to generate a deeper understanding. Our analysis yielded four putative outer/secretory hydrolases, LIC_10995, LIC_11183, LIC_11463, and LIC_12988, containing α/β hydrolase fold and displayed similarity with lipase motif. Moreover, their conservation analysis of the predicted hydrolases across the spectrum of different Leptospira species showed high clustering with the pathogenic species. Outer membrane and secretory proteins with lipolytic activity may have a role in pathogenesis. This is the first bioinformatics analysis of secretory and outer membrane α/β hydrolases from leptospiral species. However, experimental studies are indeed required to unravel this possibility.

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对致病性钩端螺旋体的推测外膜和分泌水解酶进行全面的硅学分析:对发病机制的可能影响。
外表面/膜蛋白和毒性分泌蛋白对致病至关重要。许多病原体的分泌蛋白和外膜水解酶在削弱宿主免疫系统方面发挥着重要作用。钩端螺旋体表达许多此类蛋白,其中少数已被鉴定出具有各种作用,包括宿主免疫逃避。然而,钩端螺旋体外膜和分泌水解酶的鉴定、分类、特征描述和可能作用的阐明还有待探索。在本研究中,我们使用生物信息学工具预测了致病性钩端螺旋体蛋白质组中的输出蛋白。此外,我们还重点研究了输出蛋白中的分泌和外膜推定水解酶,以加深对它们的了解。我们的分析结果表明,LIC_10995、LIC_11183、LIC_11463 和 LIC_12988 这四种推定的外膜/分泌膜水解酶含有 α/β 水解酶折叠,并与脂肪酶基序相似。此外,他们对不同钩端螺旋体物种的预测水解酶进行的保护分析表明,这些水解酶与致病物种高度聚类。具有脂肪分解活性的外膜蛋白和分泌蛋白可能在致病过程中发挥作用。这是首次对钩端螺旋体物种的分泌和外膜 α/β 水解酶进行生物信息学分析。不过,要揭示这种可能性,确实还需要进行实验研究。
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来源期刊
Biotechnology and applied biochemistry
Biotechnology and applied biochemistry 工程技术-生化与分子生物学
CiteScore
6.00
自引率
7.10%
发文量
117
审稿时长
3 months
期刊介绍: Published since 1979, Biotechnology and Applied Biochemistry is dedicated to the rapid publication of high quality, significant research at the interface between life sciences and their technological exploitation. The Editors will consider papers for publication based on their novelty and impact as well as their contribution to the advancement of medical biotechnology and industrial biotechnology, covering cutting-edge research in synthetic biology, systems biology, metabolic engineering, bioengineering, biomaterials, biosensing, and nano-biotechnology.
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