Polarized Hyperspectral Microscopic Imaging for Zebrafish.

Ximing Zhou, Hasan K Mubarak, Jaideep Kaur, P C Dave P Dingal, Baowei Fei
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Abstract

Zebrafish is a well-established animal model for developmental and disease studies. Its optical transparency at early developmental stages is ideal for tissue visualization. Interaction of light with zebrafish tissues provides information on their structure and properties. In this study, we developed a microscopic imaging system for improving the visualization of unstained zebrafish tissues on tissue slides, with two different setups: polarized light imaging and polarized hyperspectral imaging. Based on the polarized light imaging setup, we collected the RGB images of Stokes vector parameters (S0, S1, S2, and S3), and calculated the Stokes vector derived parameters: the degree of polarization (DOP), the degree of linear polarization (DOLP)). We also calculated Stokes vector data based on the polarized hyperspectral imaging setup. The preliminary results demonstrate that Stokes vector data in two imaging setups (polarized light imaging and polarized hyperspectral imaging) are capable of improving the visualization of different types of zebrafish tissues (brain, muscle, skin cells, blood vessels, and yolk). Using the images collected from larval zebrafish samples by polarized light imaging, we found that DOP and DOLP could show clearer structural information of the brain and of skin cells, muscle and blood vessels in the tail. Furthermore, DOP and DOLP parameters derived from images collected by polarized hyperspectral imaging could show clearer structural information of skin cells developing around yolk as well as the surrounding blood vessel network. In addition, polarized hyperspectral imaging could provide complementary spectral information to the spatial information on Stokes vector data of zebrafish tissues. The polarized light imaging & polarized hyperspectral imaging systems provide a better insight into the microstructures of zebrafish tissues.

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用于斑马鱼的偏振高光谱显微成像。
斑马鱼是一种成熟的发育和疾病研究动物模型。其早期发育阶段的光学透明度非常适合组织可视化。光与斑马鱼组织的相互作用可提供有关其结构和特性的信息。在这项研究中,我们开发了一种显微成像系统,用于改善组织载玻片上未染色斑马鱼组织的可视化,该系统有两种不同的设置:偏振光成像和偏振高光谱成像。基于偏振光成像设置,我们收集了斯托克斯矢量参数(S0、S1、S2 和 S3)的 RGB 图像,并计算了斯托克斯矢量衍生参数:偏振程度(DOP)、线性偏振程度(DOLP))。我们还根据偏振高光谱成像设置计算了斯托克斯矢量数据。初步结果表明,两种成像设置(偏振光成像和偏振高光谱成像)中的斯托克斯矢量数据能够改善不同类型斑马鱼组织(脑、肌肉、皮肤细胞、血管和卵黄)的可视化。利用偏振光成像技术采集的斑马鱼幼体样本图像,我们发现 DOP 和 DOLP 能更清晰地显示大脑以及尾部皮肤细胞、肌肉和血管的结构信息。此外,通过偏振高光谱成像采集的图像得出的 DOP 和 DOLP 参数能更清晰地显示卵黄周围皮肤细胞以及周围血管网络的结构信息。此外,偏振高光谱成像还能提供斑马鱼组织斯托克斯矢量数据空间信息的补充光谱信息。偏振光成像和偏振高光谱成像系统能更好地洞察斑马鱼组织的微观结构。
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