Plateau-linear reaction norm model analysis of number born alive in purebred Landrace pigs using meteorological data in Japan

IF 1.9 3区 农林科学 Q2 AGRICULTURE, DAIRY & ANIMAL SCIENCE Journal of Animal Breeding and Genetics Pub Date : 2024-05-13 DOI:10.1111/jbg.12871
Shinichiro Ogawa, Toshihiro Okamura, Yo Fukuzawa, Motohide Nishio, Kazuo Ishii, Makoto Kimata, Masamitsu Tomiyama, Masahiro Satoh
{"title":"Plateau-linear reaction norm model analysis of number born alive in purebred Landrace pigs using meteorological data in Japan","authors":"Shinichiro Ogawa,&nbsp;Toshihiro Okamura,&nbsp;Yo Fukuzawa,&nbsp;Motohide Nishio,&nbsp;Kazuo Ishii,&nbsp;Makoto Kimata,&nbsp;Masamitsu Tomiyama,&nbsp;Masahiro Satoh","doi":"10.1111/jbg.12871","DOIUrl":null,"url":null,"abstract":"<p>We performed a plateau-linear reaction norm model (RNM) analysis of number born alive (NBA) in purebred Landrace pigs, where breeding value changes according to maximum temperature at mating day, using public meteorological observation data in Japan. We analysed 52,668 NBA records obtained from 10,320 Landrace sows. Pedigree data contained 99,201 animals. Off-farm daily temperature data at the nearest weather station from each of the farms were downloaded from the Japan Meteorological Agency website. A plateau-linear RNM analysis based on daily maximum temperature on mating day (threshold temperature of 16.6°C) was performed. The percentage of the records with daily maximum temperatures at mating days of ≤16.6, ≥25.0, ≥30.0 and ≥35.0°C were 34.3%, 33.6%, 14.0% and 0.8%, respectively. The value of Akaike's information criterion for the plateau-linear RNM was lower than that for a simple repeatability model (RM). With the plateau-linear RNM, estimated value of heritability ranged from 0.14 to 0.15, while that from the RM analysis was 0.15. Additive genetic correlation between intercept and slope terms was estimated to be −0.52 from the plateau-linear RNM analysis. Estimated additive genetic correlations were &gt;0.9 between NBA at different temperatures ranging from 16.6 to 37.6°C. For the 10,320 sows, average values of prediction reliability of the intercept and slope terms for breeding values in the plateau-linear RNM were 0.47 and 0.16, respectively. Increasing weight for slope term in linear selection index could bring positive genetic gain in the slope part, but prediction accuracy would decrease. Our results imply that genetically improving heat tolerance in sows reared in Japan focusing on NBA using RNM is possible, while RNM is more complex to implement and interpret. Therefore, further study should be encouraged to make genetic improvement for heat tolerance in sows more efficient.</p>","PeriodicalId":54885,"journal":{"name":"Journal of Animal Breeding and Genetics","volume":null,"pages":null},"PeriodicalIF":1.9000,"publicationDate":"2024-05-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Animal Breeding and Genetics","FirstCategoryId":"97","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/jbg.12871","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"AGRICULTURE, DAIRY & ANIMAL SCIENCE","Score":null,"Total":0}
引用次数: 0

Abstract

We performed a plateau-linear reaction norm model (RNM) analysis of number born alive (NBA) in purebred Landrace pigs, where breeding value changes according to maximum temperature at mating day, using public meteorological observation data in Japan. We analysed 52,668 NBA records obtained from 10,320 Landrace sows. Pedigree data contained 99,201 animals. Off-farm daily temperature data at the nearest weather station from each of the farms were downloaded from the Japan Meteorological Agency website. A plateau-linear RNM analysis based on daily maximum temperature on mating day (threshold temperature of 16.6°C) was performed. The percentage of the records with daily maximum temperatures at mating days of ≤16.6, ≥25.0, ≥30.0 and ≥35.0°C were 34.3%, 33.6%, 14.0% and 0.8%, respectively. The value of Akaike's information criterion for the plateau-linear RNM was lower than that for a simple repeatability model (RM). With the plateau-linear RNM, estimated value of heritability ranged from 0.14 to 0.15, while that from the RM analysis was 0.15. Additive genetic correlation between intercept and slope terms was estimated to be −0.52 from the plateau-linear RNM analysis. Estimated additive genetic correlations were >0.9 between NBA at different temperatures ranging from 16.6 to 37.6°C. For the 10,320 sows, average values of prediction reliability of the intercept and slope terms for breeding values in the plateau-linear RNM were 0.47 and 0.16, respectively. Increasing weight for slope term in linear selection index could bring positive genetic gain in the slope part, but prediction accuracy would decrease. Our results imply that genetically improving heat tolerance in sows reared in Japan focusing on NBA using RNM is possible, while RNM is more complex to implement and interpret. Therefore, further study should be encouraged to make genetic improvement for heat tolerance in sows more efficient.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
利用日本气象数据对纯种陆地猪活产数进行高原线性反应规范模型分析
我们利用日本的公共气象观测数据,对纯种兰德良种猪的活产数(NBA)进行了高原线性反应规范模型(RNM)分析,其中繁殖值随交配日的最高温度而变化。我们分析了从 10,320 头兰系母猪中获得的 52,668 条 NBA 记录。血统数据包含 99,201 头母猪。我们从日本气象厅网站下载了离每个猪场最近的气象站的场外日温度数据。根据交配日的日最高气温(临界温度为 16.6°C)进行了高原线性 RNM 分析。交配日日最高气温≤16.6°C、≥25.0°C、≥30.0°C 和≥35.0°C 的记录百分比分别为 34.3%、33.6%、14.0% 和 0.8%。高原线性 RNM 的 Akaike 信息标准值低于简单重复性模型(RM)。高原线性 RNM 的遗传力估计值为 0.14 至 0.15,而 RM 分析的遗传力估计值为 0.15。根据高原线性 RNM 分析,截距项和斜率项之间的加性遗传相关性估计为-0.52。在 16.6 至 37.6°C 的不同温度范围内,NBA 之间的估计加性遗传相关性大于 0.9。在 10,320 头母猪中,高原线性 RNM 中育种值的截距项和斜率项预测可靠性的平均值分别为 0.47 和 0.16。增加线性选择指数中斜率项的权重可带来斜率部分的正遗传增益,但预测准确性会降低。我们的研究结果表明,利用 RNM 对日本饲养的母猪进行耐热性遗传改良是可行的,但 RNM 的实施和解释较为复杂。因此,应鼓励进一步研究,使母猪耐热性的遗传改良更有效。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Journal of Animal Breeding and Genetics
Journal of Animal Breeding and Genetics 农林科学-奶制品与动物科学
CiteScore
5.20
自引率
3.80%
发文量
58
审稿时长
12-24 weeks
期刊介绍: The Journal of Animal Breeding and Genetics publishes original articles by international scientists on genomic selection, and any other topic related to breeding programmes, selection, quantitative genetic, genomics, diversity and evolution of domestic animals. Researchers, teachers, and the animal breeding industry will find the reports of interest. Book reviews appear in many issues.
期刊最新文献
Issue Information Influence of variance component estimates on genomic predictions for growth and reproductive-related traits in Nellore cattle. Genomic selection strategies for the German Merino sheep breeding programme - A simulation study. Correction to: Rahbar et al., 2023. Defining desired genetic gains for Pacific white shrimp (Litopeneaus vannamei) breeding objectives using participatory approaches. Journal of Animal Breeding and Genetics. 2024;141:390-402. Combining genomics and semen microbiome increases the accuracy of predicting bull prolificacy.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1