Cryptosporidium spp. in large-scale sheep farms in China: prevalence and genetic diversity.

IF 3.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES Scientific Reports Pub Date : 2024-05-16 DOI:10.1038/s41598-024-62110-2
Qianming Zhao, Meng Qi, Bo Jing, Fuchun Jian, Pihong Gong, Chenyang Lu, Yaqun Yan, Zhiyang Pei, Changshen Ning
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Abstract

Cryptosporidium spp. are significant zoonotic intestinal parasites that induce diarrhea and even death across most vertebrates, including humans. Previous studies showed that sheep are important hosts for Cryptosporidium and that its distribution in sheep is influenced by geography, feeding patterns, age, and season. Environmental factors also influence the transmission of Cryptosporidium. Molecular studies of Cryptosporidium in sheep have been conducted in only a few regions of China, and studies into the effect of sheep-housing environments on Cryptosporidium transmission are even rarer. To detect the prevalence of Cryptosporidium in large-scale sheep-housing farms, a total of 1241 fecal samples were collected from sheep, 727 environmental samples were taken from sheep housing, and 30 water samples were collected in six regions of China. To ascertain the existence of the parasite and identify the species of Cryptosporidium spp., we conducted nested PCR amplification of DNA extracted from all samples using the small-subunit (SSU) rRNA gene as a target. For a more in-depth analysis of Cryptosporidium spp. subtypes, C. xiaoi-and C. ubiquitum-positive samples underwent separate nested PCR amplification targeting the 60 kDa glycoprotein (gp60) gene. The amplification of the Cryptosporidium spp. SSU rRNA gene locus from the whole genomic DNA of all samples yielded a positive rate of 1.2% (20/1241) in fecal samples, 0.1% (1/727) in environmental samples, and no positive samples were found in water samples. The prevalence of Cryptosporidium spp. infection in large-scale housed sheep was 1.7%, which was higher than that in free-ranging sheep (0.0%). The highest prevalence of infection was found in weaning lambs (6.8%). Among the different seasons, the peaks were found in the fall and winter. The most prevalent species were C. xiaoi and C. ubiquitum, with the former accounting for the majority of infections. The distribution of C. xiaoi subtypes was diverse, with XXIIIc (n = 1), XXIIId (n = 2), XXIIIe (n = 2), and XXIIIl (n = 4) identified. In contrast, only one subtype, XIIa (n = 9), was found in C. ubiquitum. In this study, C. xiaoi and C. ubiquitum were found to be the predominant species, and Cryptosporidium was found to be present in the environment. These findings provide an important foundation for the comprehensive prevention and management of Cryptosporidium in intensively reared sheep. Furthermore, by elucidating the prevalence of Cryptosporidium in sheep and its potential role in environmental transmission, this study deepens our understanding of the intricate interactions between animal health, environmental contamination, and public health dynamics.

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中国大型养羊场中的隐孢子虫属:流行率和遗传多样性。
隐孢子虫属是一种重要的人畜共患肠道寄生虫,可导致包括人类在内的大多数脊椎动物腹泻甚至死亡。先前的研究表明,绵羊是隐孢子虫的重要宿主,隐孢子虫在绵羊体内的分布受地理位置、喂养模式、年龄和季节的影响。环境因素也会影响隐孢子虫的传播。中国只有少数地区开展了羊隐孢子虫的分子研究,而羊舍环境对隐孢子虫传播影响的研究更是少之又少。为了检测规模化养羊场的隐孢子虫流行情况,我们在中国的六个地区共采集了 1241 份羊的粪便样本、727 份羊舍环境样本和 30 份水样。为了确定隐孢子虫的存在和种类,我们以小亚基(SSU)rRNA 基因为靶标,对所有样本中提取的 DNA 进行了巢式 PCR 扩增。为了更深入地分析隐孢子虫属的亚型,对小隐孢子虫和乌比特隐孢子虫阳性样本分别进行了以 60 kDa 糖蛋白(gp60)基因为目标的巢式 PCR 扩增。从所有样本的全基因组 DNA 中扩增隐孢子虫 SSU rRNA 基因座的结果显示,粪便样本中的阳性率为 1.2%(20/1241),环境样本中的阳性率为 0.1%(1/727),水样中未发现阳性样本。规模化饲养绵羊的隐孢子虫感染率为 1.7%,高于散养绵羊的感染率(0.0%)。断奶羔羊的感染率最高(6.8%)。在不同季节中,感染高峰出现在秋季和冬季。感染率最高的菌种是小尾寒羊弧菌(C. xiaoi)和大尾寒羊弧菌(C. ubiquitum),前者占感染总数的绝大部分。C. xiaoi亚型的分布多种多样,发现了XXIIIc(n = 1)、XXIIId(n = 2)、XXIIIe(n = 2)和XXIIIl(n = 4)。相反,在 C. ubiquitum 中只发现了一种亚型,即 XIIa(n = 9)。在这项研究中,发现 C. xiaoi 和 C. ubiquitum 是主要的物种,并且发现环境中存在隐孢子虫。这些发现为在集约化饲养的羊群中全面预防和管理隐孢子虫提供了重要依据。此外,通过阐明隐孢子虫在绵羊中的流行及其在环境传播中的潜在作用,这项研究加深了我们对动物健康、环境污染和公共卫生动态之间错综复杂的相互作用的理解。
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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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