Reactions of chlorophyll with hydroxyl radicals via RAF, HAT and SET mechanisms: A theoretical study

IF 2.2 4区 化学 Q3 CHEMISTRY, MULTIDISCIPLINARY Structural Chemistry Pub Date : 2024-05-16 DOI:10.1007/s11224-024-02331-3
Swarnadeep Biswas, Pradeep Kumar Shukla
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Abstract

To understand the scavenging action of chlorophyll (Chla) found in most of the vegetables towards hydroxyl (\({{\text{OH}}}^{\bullet }\)) radicals, its reactions with \({{\text{OH}}}^{\bullet }\) radicals via RAF, HAT, and SET mechanisms have been investigated theoretically using two layer ONIOM [M06-2X/6-31G(d) (High):M06-2X/3-21G (Low)] method and M06-2X/6–311 + G(d,p) level of density functional theory. The molecular electrostatic potential (MEP), highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) plots, HOMO–LUMO energy gap, global hardness (η), global softness (S), electronegativity (χ), and electrophilicity index (ω) of Chla molecule were computed and analyzed to determine its stability and reactive sites. It is found that RAF and HAT reactions are exergonic in both gaseous and aqueous media whereas SET reactions are endergonic in both media. However, all the RAF, HAT and SET reactions studied here are found to be more favourable in aqueous media vs. gas phase. The rate constants of RAF reactions at different sites are found to be of the order of ~ 6.2 × 107–1.8 × 1010 s−1 indicating that RAF reactions would be appreciably fast. This study concludes that chlorophyll can efficiently scavenge \({{\text{OH}}}^{\bullet }\) radicals preferably via RAF and HAT mechanisms and intake of water with chlorophyll can enhance its scavenging actions.

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叶绿素通过 RAF、HAT 和 SET 机制与羟自由基发生反应:理论研究
为了了解大多数蔬菜中的叶绿素(Chla)对羟基(\({{\text{OH}}}^{\bullet }\) )自由基的清除作用,我们使用两层 ONIOM [M06-2X/6-31G(d) (High)] 方法和 M06-2X/6-311 + G(d,p) 密度泛函理论水平对叶绿素与羟基(\({{\text{OH}}}^{\bullet }\) 自由基的反应进行了理论研究:M06-2X/3-21G (Low)] 方法和 M06-2X/6-311 + G(d,p) 密度泛函理论水平进行了理论研究。计算并分析了 Chla 分子的分子静电位(MEP)、最高占有分子轨道(HOMO)和最低未占有分子轨道(LUMO)图、HOMO-LUMO 能隙、全局硬度(η)、全局软度(S)、电负性(χ)和亲电性指数(ω),以确定其稳定性和反应位点。结果发现,RAF 和 HAT 反应在气态和水态介质中都是放能反应,而 SET 反应在这两种介质中都是内能反应。不过,本文研究的所有 RAF、HAT 和 SET 反应在水介质中都比在气相中更有利。不同位点 RAF 反应的速率常数约为 6.2 × 107-1.8 × 1010 s-1,表明 RAF 反应的速度相当快。这项研究得出结论,叶绿素可以通过RAF和HAT机制有效清除({{text{OH}}}^{\bullet }\) 自由基。
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来源期刊
Structural Chemistry
Structural Chemistry 化学-化学综合
CiteScore
3.80
自引率
11.80%
发文量
227
审稿时长
3.7 months
期刊介绍: Structural Chemistry is an international forum for the publication of peer-reviewed original research papers that cover the condensed and gaseous states of matter and involve numerous techniques for the determination of structure and energetics, their results, and the conclusions derived from these studies. The journal overcomes the unnatural separation in the current literature among the areas of structure determination, energetics, and applications, as well as builds a bridge to other chemical disciplines. Ist comprehensive coverage encompasses broad discussion of results, observation of relationships among various properties, and the description and application of structure and energy information in all domains of chemistry. We welcome the broadest range of accounts of research in structural chemistry involving the discussion of methodologies and structures,experimental, theoretical, and computational, and their combinations. We encourage discussions of structural information collected for their chemicaland biological significance.
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