EPSOM-Hyb: A General Purpose Estimator of Log-Marginal Likelihoods with Applications in Probabilistic Graphical Models

IF 17.7 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2024-05-15 DOI:10.3390/a17050213
Eric Chuu, Yabo Niu, A. Bhattacharya, Debdeep Pati
{"title":"EPSOM-Hyb: A General Purpose Estimator of Log-Marginal Likelihoods with Applications in Probabilistic Graphical Models","authors":"Eric Chuu, Yabo Niu, A. Bhattacharya, Debdeep Pati","doi":"10.3390/a17050213","DOIUrl":null,"url":null,"abstract":"We consider the estimation of the marginal likelihood in Bayesian statistics, with primary emphasis on Gaussian graphical models, where the intractability of the marginal likelihood in high dimensions is a frequently researched problem. We propose a general algorithm that can be widely applied to a variety of problem settings and excels particularly when dealing with near log-concave posteriors. Our method builds upon a previously posited algorithm that uses MCMC samples to partition the parameter space and forms piecewise constant approximations over these partition sets as a means of estimating the normalizing constant. In this paper, we refine the aforementioned local approximations by taking advantage of the shape of the target distribution and leveraging an expectation propagation algorithm to approximate Gaussian integrals over rectangular polytopes. Our numerical experiments show the versatility and accuracy of the proposed estimator, even as the parameter space increases in dimension and becomes more complicated.","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":"29 1","pages":""},"PeriodicalIF":17.7000,"publicationDate":"2024-05-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3390/a17050213","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

Abstract

We consider the estimation of the marginal likelihood in Bayesian statistics, with primary emphasis on Gaussian graphical models, where the intractability of the marginal likelihood in high dimensions is a frequently researched problem. We propose a general algorithm that can be widely applied to a variety of problem settings and excels particularly when dealing with near log-concave posteriors. Our method builds upon a previously posited algorithm that uses MCMC samples to partition the parameter space and forms piecewise constant approximations over these partition sets as a means of estimating the normalizing constant. In this paper, we refine the aforementioned local approximations by taking advantage of the shape of the target distribution and leveraging an expectation propagation algorithm to approximate Gaussian integrals over rectangular polytopes. Our numerical experiments show the versatility and accuracy of the proposed estimator, even as the parameter space increases in dimension and becomes more complicated.
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
EPSOM-Hyb:应用于概率图形模型的对数边际似然通用估计器
我们考虑的是贝叶斯统计中的边际似然估计,主要侧重于高斯图形模型,其中高维度边际似然的难解性是一个经常被研究的问题。我们提出了一种通用算法,该算法可广泛应用于各种问题设置,尤其在处理近对数凹后验时表现出色。我们的方法建立在之前提出的算法基础之上,该算法使用 MCMC 样本分割参数空间,并在这些分割集上形成片断常数近似值,以此来估计归一化常数。在本文中,我们利用目标分布的形状和期望传播算法来近似矩形多边形上的高斯积分,从而改进了上述局部近似方法。我们的数值实验表明,即使参数空间的维度增加、变得更加复杂,我们所提出的估计方法仍具有多功能性和准确性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
期刊最新文献
Corrigendum to "Do All Isolated Traumatic Subarachnoid Hemorrhages Need to Be Transferred to a Level 1 Trauma Center?" Molecular Engineering of Functional DNA Molecules toward Targeted Protein Degradation BX3-Mediated Directed Electrophilic Borylation: Advances, Applications, and Mechanistic Insights Chemical Synthesis of Two-Dimensional Transition Metal Dichalcogenide Heterostructures and Superlattices and Their Applications in Transistor Devices Elemental Barcoding Beyond Optics: Metal-Isotopic Suspension Array for Emerging High-Throughput Diagnostics.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1