Benchmarking deep models on retinal fundus disease diagnosis and a large-scale dataset

IF 3.4 3区 工程技术 Q2 ENGINEERING, ELECTRICAL & ELECTRONIC Signal Processing-Image Communication Pub Date : 2024-05-14 DOI:10.1016/j.image.2024.117151
Xue Xia , Ying Li , Guobei Xiao , Kun Zhan , Jinhua Yan , Chao Cai , Yuming Fang , Guofu Huang
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Abstract

Retinal fundus imaging contributes to monitoring the vision of patients by providing views of the interior surface of the eyes. Machine learning models greatly aided ophthalmologists in detecting retinal disorders from color fundus images. Hence, the quality of the data is pivotal for enhancing diagnosis algorithms, which ultimately benefits vision care and maintenance. To facilitate further research in this domain, we introduce the Eye Disease Diagnosis and Fundus Synthesis (EDDFS) dataset, comprising 28,877 fundus images. These include 15,000 healthy samples and a diverse range of images depicting various disorders such as diabetic retinopathy, age-related macular degeneration, glaucoma, pathological myopia, hypertension retinopathy, retinal vein occlusion, and Laser photocoagulation. In addition to providing the dataset, we propose a Transformer-joint convolution network for automated eye disease screening. Firstly, a co-attention structure is integrated to capture long-range attention information along with local features. Secondly, a cross-stage feature fusion module is designed to extract multi-level and disease-related information. By leveraging the dataset and our proposed network, we establish benchmarks for disease screening and grading tasks. Our experimental results underscore the network’s proficiency in both multi-label and single-label disease diagnosis, while also showcasing the dataset’s capability in supporting fundus synthesis. (The dataset and code will be available on https://github.com/xia-xx-cv/EDDFS_dataset.)

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视网膜眼底疾病诊断深度模型和大规模数据集的基准测试
视网膜眼底成像通过提供眼睛内部表面的视图,有助于监测患者的视力。机器学习模型极大地帮助了眼科医生从彩色眼底图像中检测视网膜疾病。因此,数据质量对于增强诊断算法至关重要,最终有利于视力保健和维护。为了促进该领域的进一步研究,我们引入了眼疾诊断与眼底合成(EDDFS)数据集,该数据集由 28,877 张眼底图像组成。其中包括 15,000 个健康样本和各种疾病图像,如糖尿病视网膜病变、老年性黄斑变性、青光眼、病理性近视、高血压视网膜病变、视网膜静脉闭塞和激光光凝。除了提供数据集之外,我们还提出了一种用于自动眼病筛查的变换器-关节卷积网络。首先,我们整合了共同注意结构,以捕捉长距离注意信息和局部特征。其次,我们设计了一个跨阶段特征融合模块,以提取多层次的疾病相关信息。通过利用数据集和我们提出的网络,我们建立了疾病筛查和分级任务的基准。我们的实验结果表明了该网络在多标签和单标签疾病诊断方面的能力,同时也展示了该数据集在支持眼底合成方面的能力。(数据集和代码将在 https://github.com/xia-xx-cv/EDDFS_dataset 上提供)。
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来源期刊
Signal Processing-Image Communication
Signal Processing-Image Communication 工程技术-工程:电子与电气
CiteScore
8.40
自引率
2.90%
发文量
138
审稿时长
5.2 months
期刊介绍: Signal Processing: Image Communication is an international journal for the development of the theory and practice of image communication. Its primary objectives are the following: To present a forum for the advancement of theory and practice of image communication. To stimulate cross-fertilization between areas similar in nature which have traditionally been separated, for example, various aspects of visual communications and information systems. To contribute to a rapid information exchange between the industrial and academic environments. The editorial policy and the technical content of the journal are the responsibility of the Editor-in-Chief, the Area Editors and the Advisory Editors. The Journal is self-supporting from subscription income and contains a minimum amount of advertisements. Advertisements are subject to the prior approval of the Editor-in-Chief. The journal welcomes contributions from every country in the world. Signal Processing: Image Communication publishes articles relating to aspects of the design, implementation and use of image communication systems. The journal features original research work, tutorial and review articles, and accounts of practical developments. Subjects of interest include image/video coding, 3D video representations and compression, 3D graphics and animation compression, HDTV and 3DTV systems, video adaptation, video over IP, peer-to-peer video networking, interactive visual communication, multi-user video conferencing, wireless video broadcasting and communication, visual surveillance, 2D and 3D image/video quality measures, pre/post processing, video restoration and super-resolution, multi-camera video analysis, motion analysis, content-based image/video indexing and retrieval, face and gesture processing, video synthesis, 2D and 3D image/video acquisition and display technologies, architectures for image/video processing and communication.
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