Resurgence of common respiratory viruses in patients with community-acquired pneumonia (CAP)—A prospective multicenter study

IF 4 3区 医学 Q2 VIROLOGY Journal of Clinical Virology Pub Date : 2024-05-22 DOI:10.1016/j.jcv.2024.105694
Theo Dähne , Wolfgang Bauer , Andreas Essig , Bernhard Schaaf , Grit Barten-Neiner , Christoph D. Spinner , Mathias W. Pletz , Gernot Rohde , Jan Rupp , Martin Witzenrath , Marcus Panning
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Abstract

Background

Community-acquired pneumonia (CAP) is a major global cause of death and hospitalization. Bacteria or community-acquired viruses (CARVs) cause CAP. COVID-19 associated restrictions effectively reduced the circulation of CARVs.

Objectives

The aim of this study was to analyze the proportion of CARVs in adult patients with CAP from mid-2020 to mid-2023. Specifically, we aimed to compare the rate of influenza virus, SARS-CoV-2, and RSV detections in patients aged 18–59 years and ≥60 years.

Study design

We analyze the proportion of 21 community-acquired respiratory viruses (CARVs) and three atypical bacteria (Bordetella pertussis, Legionella pneumophila, and Mycoplasma pneumoniae) in nasopharyngeal swab samples using molecular multiplex methods within the prospective, multicentre, multinational study of the German study Group CAPNETZ. We used stringent inclusion criteria throughout the study.

Results

We identified CARVs in 364/1,388 (26.2 %) patients. In detail, we detected SARS-CoV-2 in 210/1,388 (15.1 %), rhino-/enterovirus in 64/1,388 (4.6 %), influenza virus in 23/1,388 (1.6 %) and RSV in 17/1,388 (1.2 %) of all patients. We detected RSV and influenza more frequently in patients ≥60 years, especially in 22/23 compared to the previous season. None of the atypical bacteria were detected.

Conclusions

Beginning in 2023, we demonstrate a re-emergence of CARVs in CAP patients. Effective vaccines or specific antiviral therapies for more than two thirds of the detected viral infections are currently available. High detection rates of vaccine-preventable viruses in older age groups support targeted vaccination campaigns.

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社区获得性肺炎(CAP)患者中常见呼吸道病毒的复发--一项前瞻性多中心研究
背景社区获得性肺炎(CAP)是全球死亡和住院的主要原因。细菌或社区获得性病毒(CARVs)是导致 CAP 的原因。本研究旨在分析 2020 年中期至 2023 年中期 CAP 成人患者中 CARV 的比例。具体而言,我们旨在比较 18-59 岁和≥60 岁患者中流感病毒、SARS-CoV-2 和 RSV 的检出率。研究设计我们在德国 CAPNETZ 研究小组的前瞻性、多中心、跨国研究中,使用分子多重方法分析了鼻咽拭子样本中 21 种社区获得性呼吸道病毒 (CARV) 和 3 种非典型细菌(百日咳博德特氏菌、嗜肺军团菌和肺炎支原体)的比例。结果我们在 364/1,388 例(26.2%)患者中发现了 CARV。具体而言,我们在 210/1,388 例(15.1%)患者中检测到了 SARS-CoV-2,在 64/1,388 例(4.6%)患者中检测到了鼻/肠道病毒,在 23/1,388 例(1.6%)患者中检测到了流感病毒,在 17/1,388 例(1.2%)患者中检测到了 RSV。与上一季度相比,我们在年龄≥60 岁的患者中更频繁地检测到 RSV 和流感病毒,尤其是在 22/23 例患者中。结论从 2023 年开始,我们发现 CARV 在 CAP 患者中再次出现。目前已有针对三分之二以上检测到的病毒感染的有效疫苗或特异性抗病毒疗法。老年群体中疫苗可预防病毒的高检出率支持有针对性的疫苗接种活动。
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来源期刊
Journal of Clinical Virology
Journal of Clinical Virology 医学-病毒学
CiteScore
22.70
自引率
1.10%
发文量
149
审稿时长
24 days
期刊介绍: The Journal of Clinical Virology, an esteemed international publication, serves as the official journal for both the Pan American Society for Clinical Virology and The European Society for Clinical Virology. Dedicated to advancing the understanding of human virology in clinical settings, the Journal of Clinical Virology focuses on disseminating research papers and reviews pertaining to the clinical aspects of virology. Its scope encompasses articles discussing diagnostic methodologies and virus-induced clinical conditions, with an emphasis on practicality and relevance to clinical practice. The journal publishes on topics that include: • new diagnostic technologies • nucleic acid amplification and serologic testing • targeted and metagenomic next-generation sequencing • emerging pandemic viral threats • respiratory viruses • transplant viruses • chronic viral infections • cancer-associated viruses • gastrointestinal viruses • central nervous system viruses • one health (excludes animal health)
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