Genome sequence of two novel virulent clinical strains of Burkholderia pseudomallei isolated from acute melioidosis cases imported to Israel from India and Thailand.

IF 1.9 Q3 GENETICS & HEREDITY BMC genomic data Pub Date : 2024-05-23 DOI:10.1186/s12863-024-01225-x
Inbar Cohen-Gihon, Galia Zaide, Sharon Amit, Iris Zohar, Orna Schwartz, Yasmin Maor, Ofir Israeli, Gal Bilinsky, Ma'ayan Israeli, Shirley Lazar, David Gur, Moshe Aftalion, Anat Zvi, Adi Beth-Din, Erez Bar-Haim, Uri Elia, Ofer Cohen, Emanuelle Mamroud, Theodor Chitlaru
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Abstract

Objective: Burkholderia pseudomallei, the etiological cause of melioidosis, is a soil saprophyte endemic in South-East Asia, where it constitutes a public health concern of high-priority. Melioidosis cases are sporadically identified in nonendemic areas, usually associated with travelers or import of goods from endemic regions. Due to extensive intercontinental traveling and the anticipated climate change-associated alterations of the soil bacterial flora, there is an increasing concern for inadvertent establishment of novel endemic areas, which may expand the global burden of melioidosis. Rapid diagnosis, isolation and characterization of B. pseudomallei isolates is therefore of utmost importance particularly in non-endemic locations.

Data description: We report the genome sequences of two novel clinical isolates (MWH2021 and MST2022) of B. pseudomallei identified in distinct acute cases of melioidosis diagnosed in two individuals arriving to Israel from India and Thailand, respectively. The data includes preliminary genetic analysis of the genomes determining their phylogenetic classification in rapport to the genomes of 131 B. pseudomallei strains documented in the NCBI database. Inspection of the genomic data revealed the presence or absence of loci encoding for several documented virulence determinants involved in the molecular pathogenesis of melioidosis. Virulence analysis in murine models of acute or chronic melioidosis established that both strains belong to the highly virulent class of B. pseudomalleii.

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从印度和泰国输入以色列的急性瓜虫病病例中分离出的两株新型假马利伯克霍尔德氏菌临床毒株的基因组序列。
目的:假丝酵母伯克霍尔德氏菌(Burkholderia pseudomallei)是导致美拉德氏病的病原体,它是东南亚地区流行的一种土壤寄生菌,在那里构成了一个高度优先的公共卫生问题。在非流行地区发现的零星美拉伊病例通常与旅行者或来自流行地区的进口商品有关。由于广泛的洲际旅行和预期的气候变化引起的土壤细菌菌群的改变,人们越来越担心会无意中建立新的流行区,这可能会扩大美拉伊病的全球负担。因此,快速诊断、分离和鉴定假丝酵母菌分离物至关重要,尤其是在非流行地区:我们报告了两例新型假丝酵母菌临床分离株(MWH2021 和 MST2022)的基因组序列,这两例分离株是在两名分别从印度和泰国抵达以色列的患者身上发现的。这些数据包括对基因组的初步遗传分析,确定了它们与 NCBI 数据库中记录的 131 株假丝虫基因组的系统发育分类。对基因组数据的检查显示,存在或不存在编码涉及美拉德氏病分子致病机理的几个有记载的毒力决定因子的位点。在小鼠急性或慢性美拉德氏病模型中进行的毒力分析表明,这两种菌株都属于高毒力类假马来疽杆菌。
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