Coupon position does not affect Pseudomonas aeruginosa and Staphylococcus aureus biofilm densities in the CDC biofilm reactor

IF 1.7 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS Journal of microbiological methods Pub Date : 2024-05-22 DOI:10.1016/j.mimet.2024.106960
Elizabeth Buckner, Kelli Buckingham-Meyer, Lindsey A. Miller, Albert E. Parker, Christopher J. Jones, Darla M. Goeres
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Abstract

The CDC Biofilm Reactor method is the standard biofilm growth protocol for the validation of US Environmental Protection Agency biofilm label claims. However, no studies have determined the effect of coupon orientation within the reactor on biofilm growth. If positional effects have a statistically significant impact on biofilm density, they should be accounted for in the experimental design. Here, we isolate and quantify biofilms from each possible coupon surface in the reactor to quantitatively determine the positional effects in the CDC Biofilm Reactor. The results showed no statistically significant differences in viable cell density across different orientations and vertical positions in the reactor. Pseudomonas aeruginosa log densities were statistically equivalent among all coupon heights and orientations. While the Staphylococcus aureus cell growth showed no statistically significant differences, the densities were not statistically equivalent among all coupon heights and orientations due to the variability in the data. Structural differences were observed between biofilms on the high-shear baffle side of the reactor compared to the lower shear glass side of the reactor. Further studies are required to determine whether biofilm susceptibility to antimicrobials differs based on structural differences attributed to orientation.

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在 CDC 生物膜反应器中,衬垫位置不会影响铜绿假单胞菌和金黄色葡萄球菌的生物膜密度。
疾病预防控制中心生物膜反应器方法是验证美国环境保护局生物膜标签声明的标准生物膜生长协议。不过,目前还没有研究确定反应器中的试样定位对生物膜生长的影响。如果位置效应对生物膜密度有显著的统计学影响,则应在实验设计中加以考虑。在此,我们从反应器中每个可能的试样表面分离并量化生物膜,以定量确定 CDC 生物膜反应器中的位置效应。结果表明,反应器中不同方向和垂直位置的存活细胞密度在统计学上没有显著差异。铜绿假单胞菌的对数密度在统计上与所有砧板高度和方向相当。虽然金黄色葡萄球菌的细胞生长在统计学上没有显著差异,但由于数据的可变性,所有试样高度和方向的密度在统计学上并不等同。与反应器的低剪切力玻璃侧相比,反应器高剪切力挡板侧的生物膜在结构上存在差异。还需要进一步研究,以确定生物膜对抗菌剂的敏感性是否因定向造成的结构差异而不同。
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来源期刊
Journal of microbiological methods
Journal of microbiological methods 生物-生化研究方法
CiteScore
4.30
自引率
4.50%
发文量
151
审稿时长
29 days
期刊介绍: The Journal of Microbiological Methods publishes scholarly and original articles, notes and review articles. These articles must include novel and/or state-of-the-art methods, or significant improvements to existing methods. Novel and innovative applications of current methods that are validated and useful will also be published. JMM strives for scholarship, innovation and excellence. This demands scientific rigour, the best available methods and technologies, correctly replicated experiments/tests, the inclusion of proper controls, calibrations, and the correct statistical analysis. The presentation of the data must support the interpretation of the method/approach. All aspects of microbiology are covered, except virology. These include agricultural microbiology, applied and environmental microbiology, bioassays, bioinformatics, biotechnology, biochemical microbiology, clinical microbiology, diagnostics, food monitoring and quality control microbiology, microbial genetics and genomics, geomicrobiology, microbiome methods regardless of habitat, high through-put sequencing methods and analysis, microbial pathogenesis and host responses, metabolomics, metagenomics, metaproteomics, microbial ecology and diversity, microbial physiology, microbial ultra-structure, microscopic and imaging methods, molecular microbiology, mycology, novel mathematical microbiology and modelling, parasitology, plant-microbe interactions, protein markers/profiles, proteomics, pyrosequencing, public health microbiology, radioisotopes applied to microbiology, robotics applied to microbiological methods,rumen microbiology, microbiological methods for space missions and extreme environments, sampling methods and samplers, soil and sediment microbiology, transcriptomics, veterinary microbiology, sero-diagnostics and typing/identification.
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