Instructive interaction between myelodysplastic hematopoiesis and the bone marrow microenvironment at the single-cell level

Johann-Christoph Jann ∗ , Nanni Schmitt ∗ , Alexander Streuer , Qingyu Xu , Vladimir Riabov , Eva Altrock , Nadine Weimer , Verena Nowak , Julia Obländer , Iris Palme , Melda Göl , Marie Demmerle , Felicitas Rapp , Fabian Siegel , Laurenz Steiner , Mahmoud Ghazal , Angelika Duda , Verena Haselmann , Ali Darwich , Ahmed Jawhar , Daniel Nowak
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Abstract

Myelodysplastic neoplasms (MDS) are hypothesized to remodel their bone marrow (BM) microenvironment to reinforce conditions for their propagation. In this study, we investigated interactions between MDS cells and the BM niche at single-cell level. In a patient-derived xenograft (PDX) model, we analyzed 13 000 cells from different murine niche cell populations after long-term (>24 weeks) exposure to MDS vs healthy human grafts. Subsequently, we analyzed over 24 000 primary human BM cells enriched for the nonhematopoietic compartment by using whole bone fragments from n = 8 patients with MDS and n = 7 healthy, age-matched donors. In PDX who received MDS transplantation, mesenchymal cell (MSC) subpopulations were forced to overexpress hematopoietic factors such as Cxcl12 and Il7 upon contact with hematopoietic MDS cells as compared with healthy grafts. Single-cell analyses of primary in situ BM cells from patients with MDS showed highly heterogeneous MSC subpopulations on a patient-individual level. We identified inflammatory gene expression profiles as well as overexpression of C-X-C Motif Chemokine Ligand 12, KIT ligand, and Interleukin 7 in MDS MSCs and endothelial cells. In conclusion, we demonstrate reprogramming of the BM microenvironment by MDS cells, pointing to altered MSC subpopulations with increased growth factor expression profiles in a subgroup of patients with MDS.

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骨髓增生异常造血与骨髓微环境在单细胞水平上的指导性相互作用
摘要 骨髓增生异常肿瘤(MDS)被认为会重塑其骨髓(BM)微环境,以强化其繁殖条件。在这项研究中,我们在单细胞水平上研究了MDS细胞与骨髓生态位之间的相互作用。在患者衍生异种移植物(PDX)模型中,我们分析了长期(24 周)暴露于 MDS 与健康人移植物后来自不同小鼠龛细胞群的 13000 个细胞。随后,我们利用来自8名MDS患者和7名年龄匹配的健康供体的全骨碎片,分析了超过24000个富含非造血区的原代人类BM细胞。在接受了 MDS 移植的 PDX 中,与健康移植物相比,间充质干细胞亚群在与造血 MDS 细胞接触时被迫过度表达 Cxcl12 和 Il7 等造血因子。对 MDS 患者的原代原位 BM 细胞进行的单细胞分析表明,在患者个体水平上,间充质干细胞亚群具有高度异质性。我们在 MDS 间充质干细胞和内皮细胞中发现了炎症基因表达谱以及 C-X-C Motif Chemokine Ligand 12、KIT ligand 和白细胞介素 7 的过度表达。总之,我们证明了 MDS 细胞对 BM 微环境的重编程,并指出 MDS 患者亚群中的间充质干细胞亚群发生了改变,生长因子表达谱增加。
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