Ross Straughan, Karim Kadry, Sahil A. Parikh, Elazer R. Edelman, Farhad R. Nezami
{"title":"Fully automated construction of three-dimensional finite element simulations from Optical Coherence Tomography","authors":"Ross Straughan, Karim Kadry, Sahil A. Parikh, Elazer R. Edelman, Farhad R. Nezami","doi":"arxiv-2405.13643","DOIUrl":null,"url":null,"abstract":"Despite recent advances in diagnosis and treatment, atherosclerotic coronary\nartery diseases remain a leading cause of death worldwide. Various imaging\nmodalities and metrics can detect lesions and predict patients at risk;\nhowever, identifying unstable lesions is still difficult. Current techniques\ncannot fully capture the complex morphology-modulated mechanical responses that\naffect plaque stability, leading to catastrophic failure and mute the benefit\nof device and drug interventions. Finite Element (FE) simulations utilizing\nintravascular imaging OCT (Optical Coherence Tomography) are effective in\ndefining physiological stress distributions. However, creating 3D FE\nsimulations of coronary arteries from OCT images is challenging to fully\nautomate given OCT frame sparsity, limited material contrast, and restricted\npenetration depth. To address such limitations, we developed an algorithmic\napproach to automatically produce 3D FE-ready digital twins from labeled OCT\nimages. The 3D models are anatomically faithful and recapitulate mechanically\nrelevant tissue lesion components, automatically producing morphologies\nstructurally similar to manually constructed models whilst including more\nminute details. A mesh convergence study highlighted the ability to reach\nstress and strain convergence with average errors of just 5.9% and 1.6%\nrespectively in comparison to FE models with approximately twice the number of\nelements in areas of refinement. Such an automated procedure will enable\nanalysis of large clinical cohorts at a previously unattainable scale and opens\nthe possibility for in-silico methods for patient specific diagnoses and\ntreatment planning for coronary artery disease.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":"24 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-05-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Tissues and Organs","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2405.13643","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Despite recent advances in diagnosis and treatment, atherosclerotic coronary
artery diseases remain a leading cause of death worldwide. Various imaging
modalities and metrics can detect lesions and predict patients at risk;
however, identifying unstable lesions is still difficult. Current techniques
cannot fully capture the complex morphology-modulated mechanical responses that
affect plaque stability, leading to catastrophic failure and mute the benefit
of device and drug interventions. Finite Element (FE) simulations utilizing
intravascular imaging OCT (Optical Coherence Tomography) are effective in
defining physiological stress distributions. However, creating 3D FE
simulations of coronary arteries from OCT images is challenging to fully
automate given OCT frame sparsity, limited material contrast, and restricted
penetration depth. To address such limitations, we developed an algorithmic
approach to automatically produce 3D FE-ready digital twins from labeled OCT
images. The 3D models are anatomically faithful and recapitulate mechanically
relevant tissue lesion components, automatically producing morphologies
structurally similar to manually constructed models whilst including more
minute details. A mesh convergence study highlighted the ability to reach
stress and strain convergence with average errors of just 5.9% and 1.6%
respectively in comparison to FE models with approximately twice the number of
elements in areas of refinement. Such an automated procedure will enable
analysis of large clinical cohorts at a previously unattainable scale and opens
the possibility for in-silico methods for patient specific diagnoses and
treatment planning for coronary artery disease.
尽管最近在诊断和治疗方面取得了进展,但动脉粥样硬化性冠状动脉疾病仍然是全球死亡的主要原因。各种成像模式和指标可以检测病变并预测高危患者;然而,识别不稳定病变仍然困难重重。目前的技术无法完全捕捉到影响斑块稳定性的复杂形态调节机械反应,从而导致灾难性的失败,并削弱了设备和药物干预的益处。利用血管内成像 OCT(光学相干断层扫描)进行有限元(FE)模拟能有效确定生理应力分布。然而,由于 OCT 图框稀疏、材料对比度有限以及穿透深度受限,要从 OCT 图像创建冠状动脉的三维有限元模拟,完全自动化具有挑战性。为了解决这些限制,我们开发了一种算法方法,从标记的 OCT 图像中自动生成三维 FE 就绪数字双胞胎。这些三维模型在解剖学上忠实再现了与机械相关的组织病变成分,自动生成的形态结构与人工构建的模型相似,同时包含更多的细节。网格收敛研究表明,与细化区域元素数量约为两倍的 FE 模型相比,该模型能够实现应力和应变收敛,平均误差分别仅为 5.9% 和 1.6%。这种自动化程序将能够以以前无法实现的规模对大型临床队列进行分析,并为冠状动脉疾病的患者特异性诊断和治疗计划的室内方法提供了可能性。