Posttranscriptional regulation of the T-box gene midline via the 3'UTR in Drosophila is complex and cell- and tissue-dependent.

IF 5.1 3区 生物学 Q2 GENETICS & HEREDITY Genetics Pub Date : 2024-08-07 DOI:10.1093/genetics/iyae087
Kalpana Makhijani, Jordan Mar, Ivana Gaziova, Krishna Moorthi Bhat
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Abstract

The T-box (Tbx) proteins have a 180-230 amino acid DNA-binding domain, first reported in the Brachyury (T) protein. They are highly conserved among metazoans. They regulate a multitude of cellular functions in development and disease. Here, we report posttranscriptional and translational regulation of midline (mid), a Tbx member in Drosophila. We found that the 3'UTR of mid has mRNA degradation elements and AT-rich sequences. In Schneider S2 cells, mid-mRNA could be detected only when the transgene was without the 3'UTR. Similarly, the 3'UTR linked to the Renilla luciferase reporter significantly reduced the activity of the Luciferase, whereas deleting only the degradation elements from the 3'UTR resulted in reduced activity, but not as much. Overexpression of mid in MP2, an embryonic neuroblast, showed no significant difference in the levels of mid-mRNA between the 2 transgenes, with and without the 3'UTR, indicating the absence of posttranscriptional regulation of mid in MP2. Moreover, while elevated mid-RNA was detected in MP2 in nearly all hemisegments, only a fifth of those hemisegments had elevated levels of the protein. Overexpression of the 2 transgenes resulted in MP2-lineage defects at about the same frequency. These results indicate a translational/posttranslational regulation of mid in MP2. The regulation of ectopically expressed mid in the wing imaginal disc was complex. In the wing disc, where mid is not expressed, the ectopic expression of the transgene lacking the 3'UTR had a higher level of mid-RNA and the protein had a stronger phenotypic effect. These results indicate that the 3'UTR can subject mid-mRNA to degradation in a cell- and tissue-specific manner. We further report a balancer-mediated transgenerational modifier effect on the expression and gain of function effects of the 2 transgenes.

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果蝇T-box基因中线通过3'UTR的转录后调控是复杂的,并依赖于细胞和组织。
T-box 蛋白有一个 180-230 个氨基酸的 DNA 结合域,最早见于 Brachyury (T) 蛋白。它在后生动物中高度保守。它们在发育和疾病过程中调控多种细胞功能。在这里,我们报告了果蝇中 Tbx 成员 midline(中线)的转录后和翻译调控。我们发现 mid 的 3'UTR 有 mRNA 降解元件和富含 AT 的序列。在施耐德S2细胞中,只有当转基因不含3'UTR时,才能检测到mid的mRNA。同样,与雷尼拉荧光素酶报告基因连接的 3'UTR 也会显著降低荧光素酶的活性。而只删除 3'UTR 中的降解元件会导致活性降低,但降低幅度不大。在胚胎神经母细胞MP2中过表达mid,结果显示两种转基因(带3'UTR和不带3'UTR)的mid mRNA水平没有明显差异,这表明在MP2中mid不存在转录后调控。此外,虽然在几乎所有的半片段中都检测到 MP2 中 mid RNA 水平升高,但其中只有五分之一的半片段蛋白质水平升高。两种转基因的过度表达导致的 MP2 系缺陷频率大致相同。这些结果表明,MP2 中的 mid 存在翻译/翻译后调控。翼状胚盘中异位表达的 mid 的调控是复杂的。在没有表达mid的翅叶中,异位表达缺乏3'UTR的转基因的mid RNA和蛋白质水平更高,表型效应也更强。这些结果表明,3'UTR能以细胞和组织特异性的方式使mid-mRNA降解。我们进一步报告了平衡器介导的转基因修饰效应对两种转基因的表达和功能增益效应的影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Genetics
Genetics GENETICS & HEREDITY-
CiteScore
6.90
自引率
6.10%
发文量
177
审稿时长
1.5 months
期刊介绍: GENETICS is published by the Genetics Society of America, a scholarly society that seeks to deepen our understanding of the living world by advancing our understanding of genetics. Since 1916, GENETICS has published high-quality, original research presenting novel findings bearing on genetics and genomics. The journal publishes empirical studies of organisms ranging from microbes to humans, as well as theoretical work. While it has an illustrious history, GENETICS has changed along with the communities it serves: it is not your mentor''s journal. The editors make decisions quickly – in around 30 days – without sacrificing the excellence and scholarship for which the journal has long been known. GENETICS is a peer reviewed, peer-edited journal, with an international reach and increasing visibility and impact. All editorial decisions are made through collaboration of at least two editors who are practicing scientists. GENETICS is constantly innovating: expanded types of content include Reviews, Commentary (current issues of interest to geneticists), Perspectives (historical), Primers (to introduce primary literature into the classroom), Toolbox Reviews, plus YeastBook, FlyBook, and WormBook (coming spring 2016). For particularly time-sensitive results, we publish Communications. As part of our mission to serve our communities, we''ve published thematic collections, including Genomic Selection, Multiparental Populations, Mouse Collaborative Cross, and the Genetics of Sex.
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