Carbohydrate Structure Database: current state and recent developments.

IF 3.8 2区 化学 Q1 BIOCHEMICAL RESEARCH METHODS Analytical and Bioanalytical Chemistry Pub Date : 2025-02-01 Epub Date: 2024-06-25 DOI:10.1007/s00216-024-05383-w
Philip Toukach
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Abstract

Carbohydrate Structure Database (CSDB) is a curated glycan data collection and a glycoinformatic platform. In this report, its database, analytical, and other components that have appeared for the recent years are reviewed. The major improvements were achieving close-to-full coverage on glycans from microorganisms, launching modules for glycosyltransferases and saccharide conformations, online glycan builder and 3D modeler, NMR simulator, NMR-based structure predictor, and other tools.

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碳水化合物结构数据库:现状和最新发展。
碳水化合物结构数据库(CSDB)是一个经过整理的聚糖数据集和聚糖形式平台。本报告对其数据库、分析和近年来出现的其他组件进行了回顾。主要改进包括:实现了对微生物聚糖的接近全覆盖、推出了糖基转移酶和糖构象模块、在线聚糖生成器和三维建模器、核磁共振模拟器、基于核磁共振的结构预测器以及其他工具。
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来源期刊
CiteScore
8.00
自引率
4.70%
发文量
638
审稿时长
2.1 months
期刊介绍: Analytical and Bioanalytical Chemistry’s mission is the rapid publication of excellent and high-impact research articles on fundamental and applied topics of analytical and bioanalytical measurement science. Its scope is broad, and ranges from novel measurement platforms and their characterization to multidisciplinary approaches that effectively address important scientific problems. The Editors encourage submissions presenting innovative analytical research in concept, instrumentation, methods, and/or applications, including: mass spectrometry, spectroscopy, and electroanalysis; advanced separations; analytical strategies in “-omics” and imaging, bioanalysis, and sampling; miniaturized devices, medical diagnostics, sensors; analytical characterization of nano- and biomaterials; chemometrics and advanced data analysis.
期刊最新文献
My perspective of meaningful research for Analytical and Bioanalytical Chemistry. Quantitative proteome-wide O-glycoproteomics analysis with FragPipe. Carbohydrate Structure Database: current state and recent developments. Glycoscience data content in the NCBI Glycans and PubChem. Navigating the maze of mass spectra: a machine-learning guide to identifying diagnostic ions in O-glycan analysis.
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