Oxford Nanopore Technologies (ONT) Full-length Transcriptomics Shows Electroacupuncture ameliorates Lipid Metabolic Disorder through Suppressing Hepatic Pdia3/Perk/Qrich1 Expression in Rats.

IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS Combinatorial chemistry & high throughput screening Pub Date : 2024-06-26 DOI:10.2174/0113862073290732240522103606
Pu Zhang, Yue Li, Ning Zhang, Xiao-Gang Wang, Yan-Wei Qu, Hui Pei, Xiao-Chun Liu, Qi Liu, Pei-Ran Lv, Xian Zhao
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Abstract

Background: The incidence of dyslipidemia increases after menopause. Electroacupuncture (EA) has been recommended for menopause-related disease. However, the positive effect on lipid metabolism disorders is still unclear.

Objectives: To investigate the underlying mechanism of EA treatment on lipid metabolism disorders through ONT full-length transcriptome sequencing Methods: Adult female SD rats were randomly divided into Ctrl, sham operation+high-fat feed(Sham+HFD), Ovariectomized+high-fat feed (OVX+HFD), Ovariectomized+high-fat feed + Atorvastatin (OVX+HFD+ATO) and OVX+HFD+EA groups. Periovarian adipose tissue around the bilateral ovaries of rats in the Sham+HFD group was resected. Rats in the OVX+HFD, OVX+HFD+ATO and OVX+HFD+EA groups were subjected to bilateral oophorectomy to prepare the ovariectomized rat model. Treatment was applied to rats in the OVX+HFD+EA group. ST36, PC6, SP6, BL18 and ST40 were the selected acupoints. Daily food intake and body weights of rats were recorded. The samples were collected 30 days after treatment. The serum levels of total cholesterol (TC), triglyceride (TG), low-density lipoprotein cholesterol (LDL-C) and high-density lipoprotein (HDL-C) were detected to assess the improvement of lipid metabolism disorders. HE and oil red O staining were used to stain the liver tissues. Total RNA was extracted from liver tissues, and its transcriptional changes were determined by high-throughput sequencing. Additionally, RTÁqPCR and immunofluorescence staining were used to verify the crucial signal pathway screened by the ONT fullÁlength transcriptome sequencing.

Results: EA treatment resulted in a lowered weight of perirenal fat and liver and a significant improvement in the color of the liver. In addition, EA could improve the lipid profile and hepatic steatosis in OVX+HFD rats. According to fullÁlength transcriptome sequencing, 2292 genes showed differential expression in the OVX+HFD group; of these, 1121 were upregulated and 1171 down-regulated. 609 DEGs were found in the OVX+HFD+EA group compared to the OVX+HFD group; 235 up-regulated and 374 down-regulated. We also found that 77 genes are significantly upregulated after EA intervention through Venn map analysis (including Agtr1a, Pdia3, etc.), which may be the targeted genes for EA treatment of lipid metabolism disorders. Finally, we verified the expression of Pdia3, Perk and Qrich1 levels in liver tissues. HFD feeding could increase the expression of Pdia3 and its downstream signal pathways molecular Perk and Qrich1. But these effects were reversed by EA treatment, the results demonstrated that the expression of pdia3, Perk, as well as Qrich1 of OVX+HFD rats had a decreasing trend after EA treatment.

Conclusions: EA could ameliorate lipid metabolic disorder in OVX+HFD rats. The Pdia3/Perk/Qrich1 signal pathway may play crucial roles in the improvement of lipid metabolism disorder of OVX+HFD rats after EA treatment.

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牛津纳米孔技术公司 (ONT) 的全长转录组学研究表明,电针可通过抑制大鼠肝脏 Pdia3/Perk/Qrich1 的表达改善脂质代谢紊乱。
背景:绝经后,血脂异常的发病率增加。电针(EA)已被推荐用于治疗更年期相关疾病。然而,其对血脂代谢紊乱的积极作用尚不明确:通过 ONT 全长转录组测序研究 EA 治疗脂质代谢紊乱的内在机制:将成年雌性SD大鼠随机分为对照组、假手术+高脂饲料组(Sham+HFD)、卵巢切除+高脂饲料组(OVX+HFD)、卵巢切除+高脂饲料+阿托伐他汀组(OVX+HFD+ATO)和OVX+HFD+EA组。Sham+HFD组大鼠双侧卵巢周围的脂肪组织被切除。对 OVX+HFD、OVX+HFD+ATO 和 OVX+HFD+EA 组大鼠进行双侧卵巢切除术,以制备卵巢切除大鼠模型。对 OVX+HFD+EA 组大鼠进行治疗。所选穴位为 ST36、PC6、SP6、BL18 和 ST40。记录大鼠每天的进食量和体重。治疗 30 天后收集样本。检测血清总胆固醇(TC)、甘油三酯(TG)、低密度脂蛋白胆固醇(LDL-C)和高密度脂蛋白(HDL-C)的水平,以评估脂质代谢紊乱的改善情况。肝组织采用 HE 和油红 O 染色。从肝组织中提取总 RNA,并通过高通量测序确定其转录变化。此外,还采用RTÁqPCR和免疫荧光染色来验证ONT全长Á转录组测序筛选出的关键信号通路:结果:EA能降低肾周脂肪和肝脏的重量,显著改善肝脏的颜色。此外,EA还能改善OVX+HFD大鼠的血脂状况和肝脏脂肪变性。根据全长和急性转录组测序,2292个基因在OVX+HFD组中出现差异表达,其中1121个基因上调,1171个基因下调。与 OVX+HFD 组相比,OVX+HFD+EA 组发现了 609 个 DEGs,其中 235 个上调,374 个下调。通过 Venn map 分析,我们还发现 77 个基因在 EA 干预后明显上调(包括 Agtr1a、Pdia3 等),这些基因可能是 EA 治疗脂代谢紊乱的靶基因。最后,我们验证了Pdia3、Perk和Qrich1在肝组织中的表达水平。高密度脂蛋白(HFD)喂养可增加Pdia3及其下游信号通路分子Perk和Qrich1的表达。结果表明,EA治疗后,OVX+HFD大鼠Pdia3、Perk和Qrich1的表达呈下降趋势:结论:EA能改善OVX+HFD大鼠的脂质代谢紊乱。结论:EA能改善OVX+HFD大鼠的脂质代谢紊乱,Pdia3/Perk/Qrich1信号通路可能在EA治疗后OVX+HFD大鼠脂质代谢紊乱的改善中起关键作用。
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来源期刊
CiteScore
3.10
自引率
5.60%
发文量
327
审稿时长
7.5 months
期刊介绍: Combinatorial Chemistry & High Throughput Screening (CCHTS) publishes full length original research articles and reviews/mini-reviews dealing with various topics related to chemical biology (High Throughput Screening, Combinatorial Chemistry, Chemoinformatics, Laboratory Automation and Compound management) in advancing drug discovery research. Original research articles and reviews in the following areas are of special interest to the readers of this journal: Target identification and validation Assay design, development, miniaturization and comparison High throughput/high content/in silico screening and associated technologies Label-free detection technologies and applications Stem cell technologies Biomarkers ADMET/PK/PD methodologies and screening Probe discovery and development, hit to lead optimization Combinatorial chemistry (e.g. small molecules, peptide, nucleic acid or phage display libraries) Chemical library design and chemical diversity Chemo/bio-informatics, data mining Compound management Pharmacognosy Natural Products Research (Chemistry, Biology and Pharmacology of Natural Products) Natural Product Analytical Studies Bipharmaceutical studies of Natural products Drug repurposing Data management and statistical analysis Laboratory automation, robotics, microfluidics, signal detection technologies Current & Future Institutional Research Profile Technology transfer, legal and licensing issues Patents.
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