Development of high-quality artificial intelligence for computer-aided diagnosis in determining subtypes of colorectal cancer.

IF 3.7 3区 医学 Q2 GASTROENTEROLOGY & HEPATOLOGY Journal of Gastroenterology and Hepatology Pub Date : 2024-06-26 DOI:10.1111/jgh.16661
Weihao Weng, Naohisa Yoshida, Yukiko Morinaga, Satoshi Sugino, Yuri Tomita, Reo Kobayashi, Ken Inoue, Ryohei Hirose, Osamu Dohi, Yoshito Itoh, Xin Zhu
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Abstract

Background and aim: There are no previous studies in which computer-aided diagnosis (CAD) diagnosed colorectal cancer (CRC) subtypes correctly. In this study, we developed an original CAD for the diagnosis of CRC subtypes.

Methods: Pretraining for the CAD based on ResNet was performed using ImageNet and five open histopathological pretraining image datasets (HiPreD) containing 3 million images. In addition, sparse attention was introduced to improve the CAD compared to other attention networks. One thousand and seventy-two histopathological images from 29 early CRC cases at Kyoto Prefectural University of Medicine from 2019 to 2022 were collected (857 images for training and validation, 215 images for test). All images were annotated by a qualified histopathologist for segmentation of normal mucosa, adenoma, pure well-differentiated adenocarcinoma (PWDA), and moderately/poorly differentiated adenocarcinoma (MPDA). Diagnostic ability including dice sufficient coefficient (DSC) and diagnostic accuracy were evaluated.

Results: Our original CAD, named Colon-seg, with the pretraining of both HiPreD and ImageNET showed a better DSC (88.4%) compared to CAD without both pretraining (76.8%). Regarding the attentional mechanism, Colon-seg with sparse attention showed a better DSC (88.4%) compared to other attentional mechanisms (dual: 79.7%, ECA: 80.7%, shuffle: 84.7%, SK: 86.9%). In addition, the DSC of Colon-seg (88.4%) was better than other types of CADs (TransUNet: 84.7%, MultiResUnet: 86.1%, Unet++: 86.7%). The diagnostic accuracy of Colon-seg for each histopathological type was 94.3% for adenoma, 91.8% for PWDA, and 92.8% for MPDA.

Conclusion: A deep learning-based CAD for CRC subtype differentiation was developed with pretraining and fine-tuning of abundant histopathological images.

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开发用于确定结直肠癌亚型的计算机辅助诊断的高质量人工智能。
背景和目的:目前还没有计算机辅助诊断(CAD)能正确诊断结直肠癌(CRC)亚型的研究。在这项研究中,我们开发了一种用于诊断 CRC 亚型的原始 CAD:方法:使用 ImageNet 和五个开放的组织病理学预训练图像数据集(HiPreD)(包含 300 万张图像)对基于 ResNet 的计算机辅助诊断系统进行预训练。此外,与其他注意力网络相比,还引入了稀疏注意力来改进计算机辅助诊断。收集了京都府立医科大学从 2019 年到 2022 年期间 29 例早期 CRC 的 172 张组织病理学图像(857 张用于训练和验证,215 张用于测试)。所有图像均由合格的组织病理学家进行注释,以分割正常粘膜、腺瘤、纯分化良好腺癌(PWDA)和中度/低度分化腺癌(MPDA)。对诊断能力,包括骰子充分系数(DSC)和诊断准确性进行了评估:结果:与未进行HiPreD和ImageNET预培训的CAD(76.8%)相比,我们的原始CAD(名为Colon-seg)显示出更好的DSC(88.4%)。在注意机制方面,与其他注意机制(双注意:79.7%;ECA:80.7%;洗牌:84.7%;SK:86.9%)相比,使用稀疏注意的 Colon-seg 显示出更好的 DSC(88.4%)。此外,Colon-seg 的 DSC(88.4%)也优于其他类型的 CAD(TransUNet:84.7%;MultiResUnet:86.1%;Unet++:86.7%)。Colon-seg对每种组织病理学类型的诊断准确率分别为:腺瘤 94.3%、PWDA 91.8%、MPDA 92.8%:通过对丰富的组织病理学图像进行预训练和微调,开发出了基于深度学习的 CRC 亚型分辨计算机辅助诊断系统。
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来源期刊
CiteScore
7.90
自引率
2.40%
发文量
326
审稿时长
2.3 months
期刊介绍: Journal of Gastroenterology and Hepatology is produced 12 times per year and publishes peer-reviewed original papers, reviews and editorials concerned with clinical practice and research in the fields of hepatology, gastroenterology and endoscopy. Papers cover the medical, radiological, pathological, biochemical, physiological and historical aspects of the subject areas. All submitted papers are reviewed by at least two referees expert in the field of the submitted paper.
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