Integrating Multiple Bacterial Phenotypes and Bayesian Network for Analyzing Health Risks of Pathogens in Plastisphere

IF 6.7 1区 化学 Q1 CHEMISTRY, ANALYTICAL Analytical Chemistry Pub Date : 2024-07-01 DOI:10.1021/acs.analchem.4c01433
Hong-Zhe Li, Wen-Jing Li, Zi-Jian Wang, Qing-Lin Chen, Mia Kristine Staal Jensen, Min Qiao and Li Cui*, 
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Abstract

Plastic pollution represents a critical threat to soil ecosystems and even humans, as plastics can serve as a habitat for breeding and refuging pathogenic microorganisms against stresses. However, evaluating the health risk of plastispheres is difficult due to the lack of risk factors and quantification model. Here, DNA sequencing, single-cell Raman-D2O labeling, and transformation assay were used to quantify key risk factors of plastisphere, including pathogen abundance, phenotypic resistance to various stresses (antibiotic and pesticide), and ability to acquire antibiotic resistance genes. A Bayesian network model was newly introduced to integrate these three factors and infer their causal relationships. Using this model, the risk of pathogen in the plastisphere is found to be nearly 3 magnitudes higher than that in free-living state. Furthermore, this model exhibits robustness for risk prediction, even in the absence of one factor. Our framework offers a novel and practical approach to assessing the health risk of plastispheres, contributing to the management of plastic-related threats to human health.

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整合多种细菌表型和贝叶斯网络,分析塑料中病原体的健康风险。
塑料污染对土壤生态系统甚至人类都构成了严重威胁,因为塑料可以作为病原微生物繁殖和避难的栖息地,以抵御压力。然而,由于缺乏风险因素和量化模型,评估塑料颗粒的健康风险十分困难。本文利用DNA测序、单细胞拉曼-D2O标记和转化试验来量化质球的关键风险因素,包括病原体丰度、对各种胁迫(抗生素和杀虫剂)的表型抗性以及获得抗生素抗性基因的能力。新引入的贝叶斯网络模型整合了这三个因素,并推断出它们之间的因果关系。利用该模型发现,质体中的病原体风险比自由生活状态下的病原体风险高出近 3 倍。此外,即使在缺少一个因素的情况下,该模型也能稳健地预测风险。我们的框架为评估塑球的健康风险提供了一种新颖实用的方法,有助于管理与塑料有关的对人类健康的威胁。
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来源期刊
Analytical Chemistry
Analytical Chemistry 化学-分析化学
CiteScore
12.10
自引率
12.20%
发文量
1949
审稿时长
1.4 months
期刊介绍: Analytical Chemistry, a peer-reviewed research journal, focuses on disseminating new and original knowledge across all branches of analytical chemistry. Fundamental articles may explore general principles of chemical measurement science and need not directly address existing or potential analytical methodology. They can be entirely theoretical or report experimental results. Contributions may cover various phases of analytical operations, including sampling, bioanalysis, electrochemistry, mass spectrometry, microscale and nanoscale systems, environmental analysis, separations, spectroscopy, chemical reactions and selectivity, instrumentation, imaging, surface analysis, and data processing. Papers discussing known analytical methods should present a significant, original application of the method, a notable improvement, or results on an important analyte.
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