FOXCUT regulates the malignant phenotype of triple-negative breast Cancer via the miR-337-3p/ANP32E Axis

IF 3.4 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Genomics Pub Date : 2024-06-27 DOI:10.1016/j.ygeno.2024.110892
Lei Shi, Ziwen Zhang, Yuan Huang, Yabing Zheng
{"title":"FOXCUT regulates the malignant phenotype of triple-negative breast Cancer via the miR-337-3p/ANP32E Axis","authors":"Lei Shi,&nbsp;Ziwen Zhang,&nbsp;Yuan Huang,&nbsp;Yabing Zheng","doi":"10.1016/j.ygeno.2024.110892","DOIUrl":null,"url":null,"abstract":"<div><h3>Background</h3><p>The lack of specific molecular targets and the rapid spread lead to a worse prognosis of triple-negative breast cancer (TNBC). Therefore, identifying new therapeutic and prognostic biomarkers helps to develop effective treatment strategies for TNBC.</p></div><div><h3>Methods</h3><p>Through preliminary bioinformatics analysis, FOXCUT was found to be significantly overexpressed in breast cancer, especially in TNBC. Tissue samples were collected from 15 TNBC patients, and qRT-PCR was employed to validate the expression of FOXCUT in both TNBC patient tissues and TNBC cell lines. We also carried out the GSEA analysis and KEGG enrichment analysis of FOXCUT. Additionally, the effects of FOXCUT knockdown on TNBC cell malignant behaviors, and aerobic glycolysis were assessed by methods including CCK-8, Transwell, western blot, and Seahorse XF 96 analyses. Moreover, utilizing databases predicting interactions between ceRNAs, corresponding lncRNA-miRNA binding relationships, and miRNA-mRNA interactions were predicted. These predictions were subsequently validated through RNA immunoprecipitation and dual-luciferase reporter assays.</p></div><div><h3>Results</h3><p>FOXCUT exhibited high expression in both TNBC tissues and cell lines, fostering cell malignant behaviors and glycolysis. FOXCUT was found to sponge miR-337-3p, while miR-337-3p negatively regulated the expression of ANP32E. Consequently, FOXCUT ultimately facilitated the malignant phenotype of TNBC by upregulating ANP32E expression.</p></div><div><h3>Conclusion</h3><p>This study elucidated the role of FOXCUT in elevating aerobic glycolysis levels in TNBC and driving malignant cancer cell development via the miR-337-3p/ANP32E regulatory axis.</p></div>","PeriodicalId":12521,"journal":{"name":"Genomics","volume":null,"pages":null},"PeriodicalIF":3.4000,"publicationDate":"2024-06-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0888754324001137/pdfft?md5=f6b04dfe47c32ddb895f237ec04491a6&pid=1-s2.0-S0888754324001137-main.pdf","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genomics","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0888754324001137","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Background

The lack of specific molecular targets and the rapid spread lead to a worse prognosis of triple-negative breast cancer (TNBC). Therefore, identifying new therapeutic and prognostic biomarkers helps to develop effective treatment strategies for TNBC.

Methods

Through preliminary bioinformatics analysis, FOXCUT was found to be significantly overexpressed in breast cancer, especially in TNBC. Tissue samples were collected from 15 TNBC patients, and qRT-PCR was employed to validate the expression of FOXCUT in both TNBC patient tissues and TNBC cell lines. We also carried out the GSEA analysis and KEGG enrichment analysis of FOXCUT. Additionally, the effects of FOXCUT knockdown on TNBC cell malignant behaviors, and aerobic glycolysis were assessed by methods including CCK-8, Transwell, western blot, and Seahorse XF 96 analyses. Moreover, utilizing databases predicting interactions between ceRNAs, corresponding lncRNA-miRNA binding relationships, and miRNA-mRNA interactions were predicted. These predictions were subsequently validated through RNA immunoprecipitation and dual-luciferase reporter assays.

Results

FOXCUT exhibited high expression in both TNBC tissues and cell lines, fostering cell malignant behaviors and glycolysis. FOXCUT was found to sponge miR-337-3p, while miR-337-3p negatively regulated the expression of ANP32E. Consequently, FOXCUT ultimately facilitated the malignant phenotype of TNBC by upregulating ANP32E expression.

Conclusion

This study elucidated the role of FOXCUT in elevating aerobic glycolysis levels in TNBC and driving malignant cancer cell development via the miR-337-3p/ANP32E regulatory axis.

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
FOXCUT通过miR-337-3p/ANP32E轴调节三阴性乳腺癌的恶性表型
背景:缺乏特异性分子靶点和快速扩散导致三阴性乳腺癌(TNBC)的预后较差。因此,确定新的治疗和预后生物标志物有助于为 TNBC 制定有效的治疗策略:方法:通过初步的生物信息学分析,发现FOXCUT在乳腺癌中显著过表达,尤其是在TNBC中。我们采集了15例TNBC患者的组织样本,并采用qRT-PCR方法验证了FOXCUT在TNBC患者组织和TNBC细胞系中的表达。我们还对 FOXCUT 进行了 GSEA 分析和 KEGG 富集分析。此外,我们还通过CCK-8、Transwell、Western blot和Seahorse XF 96分析等方法评估了FOXCUT敲除对TNBC细胞恶性行为和有氧糖酵解的影响。此外,利用预测ceRNA之间相互作用的数据库,预测了相应的lncRNA-miRNA结合关系以及miRNA-mRNA相互作用。这些预测结果随后通过 RNA 免疫沉淀和双荧光素酶报告实验进行了验证:结果:FOXCUT在TNBC组织和细胞系中都有高表达,促进了细胞的恶性行为和糖酵解。研究发现,FOXCUT 能疏导 miR-337-3p,而 miR-337-3p 能负向调节 ANP32E 的表达。因此,FOXCUT最终通过上调ANP32E的表达促进了TNBC的恶性表型:本研究阐明了FOXCUT在TNBC中通过miR-337-3p/ANP32E调控轴提高有氧糖酵解水平并驱动恶性癌细胞发展的作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Genomics
Genomics 生物-生物工程与应用微生物
CiteScore
9.60
自引率
2.30%
发文量
260
审稿时长
60 days
期刊介绍: Genomics is a forum for describing the development of genome-scale technologies and their application to all areas of biological investigation. As a journal that has evolved with the field that carries its name, Genomics focuses on the development and application of cutting-edge methods, addressing fundamental questions with potential interest to a wide audience. Our aim is to publish the highest quality research and to provide authors with rapid, fair and accurate review and publication of manuscripts falling within our scope.
期刊最新文献
Key role of CYP17A1 in Leydig cell function and testicular development in Qianbei Ma goats. Multiomics reveals blood differential metabolites and differential genes in the early onset of ketosis in dairy cows STRIP2 is regulated by the transcription factor Sp1 and promotes lung adenocarcinoma progression via activating the PI3K/AKT/mTOR/MYC signaling pathway Brain lncRNA-mRNA co-expression regulatory networks and alcohol use disorder Whole-genome sequence of Sclerotium delphinii, a pathogenic fungus of Dendrobium officinale southern blight
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1