Enhancing healthcare process analysis through object-centric process mining: Transforming OMOP common data models into object-centric event logs

IF 4 2区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS Journal of Biomedical Informatics Pub Date : 2024-06-27 DOI:10.1016/j.jbi.2024.104682
Gyunam Park , Yaejin Lee , Minsu Cho
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Abstract

Objectives:

This study aims to enhance the analysis of healthcare processes by introducing Object-Centric Process Mining (OCPM). By offering a holistic perspective that accounts for the interactions among various objects, OCPM transcends the constraints of conventional patient-centric process mining approaches, ensuring a more detailed and inclusive understanding of healthcare dynamics.

Methods:

We develop a novel method to transform the Observational Medical Outcomes Partnership Common Data Models (OMOP CDM) into Object-Centric Event Logs (OCELs). First, an OMOP CDM4PM is created from the standard OMOP CDM, focusing on data relevant to generating OCEL and addressing healthcare data’s heterogeneity and standardization challenges. Second, this subset is transformed into OCEL based on specified healthcare criteria, including identifying various object types, clinical activities, and their relationships. The methodology is tested on the MIMIC-IV database to evaluate its effectiveness and utility.

Results:

Our proposed method effectively produces OCELs when applied to the MIMIC-IV dataset, allowing for the implementation of OCPM in the healthcare industry. We rigorously evaluate the comprehensiveness and level of abstraction to validate our approach’s effectiveness. Additionally, we create diverse object-centric process models intricately designed to navigate the complexities inherent in healthcare processes.

Conclusion:

Our approach introduces a novel perspective by integrating multiple viewpoints simultaneously. To the best of our knowledge, this is the inaugural application of OCPM within the healthcare sector, marking a significant advancement in the field.

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通过以对象为中心的流程挖掘加强医疗流程分析:将 OMOP 通用数据模型转化为以对象为中心的事件日志。
研究目的本研究旨在通过引入以对象为中心的流程挖掘(OCPM)来加强对医疗流程的分析。OCPM 从整体角度考虑各种对象之间的相互作用,超越了传统的以患者为中心的流程挖掘方法的限制,确保对医疗动态有更详细、更全面的了解:我们开发了一种新方法,将观察性医疗结果合作组织通用数据模型(OMOP CDM)转化为以对象为中心的事件日志(OCEL)。首先,从标准 OMOP CDM 创建 OMOP CDM4PM,重点关注与生成 OCEL 相关的数据,并解决医疗保健数据的异构性和标准化难题。其次,根据指定的医疗标准将该子集转换为 OCEL,包括识别各种对象类型、临床活动及其关系。该方法在 MIMIC-IV 数据库中进行了测试,以评估其有效性和实用性:结果:我们提出的方法在应用于 MIMIC-IV 数据集时有效地生成了 OCEL,使 OCPM 得以在医疗行业中实施。我们对方法的全面性和抽象程度进行了严格评估,以验证方法的有效性。此外,我们还创建了多种以对象为中心的流程模型,这些模型设计精巧,可应对医疗保健流程固有的复杂性。我们的方法通过同时整合多种观点引入了一种新的视角。据我们所知,这是 OCPM 在医疗保健领域的首次应用,标志着该领域的重大进展。
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来源期刊
Journal of Biomedical Informatics
Journal of Biomedical Informatics 医学-计算机:跨学科应用
CiteScore
8.90
自引率
6.70%
发文量
243
审稿时长
32 days
期刊介绍: The Journal of Biomedical Informatics reflects a commitment to high-quality original research papers, reviews, and commentaries in the area of biomedical informatics methodology. Although we publish articles motivated by applications in the biomedical sciences (for example, clinical medicine, health care, population health, and translational bioinformatics), the journal emphasizes reports of new methodologies and techniques that have general applicability and that form the basis for the evolving science of biomedical informatics. Articles on medical devices; evaluations of implemented systems (including clinical trials of information technologies); or papers that provide insight into a biological process, a specific disease, or treatment options would generally be more suitable for publication in other venues. Papers on applications of signal processing and image analysis are often more suitable for biomedical engineering journals or other informatics journals, although we do publish papers that emphasize the information management and knowledge representation/modeling issues that arise in the storage and use of biological signals and images. System descriptions are welcome if they illustrate and substantiate the underlying methodology that is the principal focus of the report and an effort is made to address the generalizability and/or range of application of that methodology. Note also that, given the international nature of JBI, papers that deal with specific languages other than English, or with country-specific health systems or approaches, are acceptable for JBI only if they offer generalizable lessons that are relevant to the broad JBI readership, regardless of their country, language, culture, or health system.
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