mitoPADdb: A database of mitochondrial proteins associated with diseases

IF 3.9 3区 生物学 Q2 CELL BIOLOGY Mitochondrion Pub Date : 2024-06-27 DOI:10.1016/j.mito.2024.101927
Jagannath Das , Sudipto Bhattacharjee , Sudipto Saha
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Abstract

Mitochondrial protein/gene mutations and expression variations contribute to the pathogenesis of various diseases, such as neurodegenerative and metabolic diseases. Detailed studies on mitochondrial protein-encoding (MPE) genes across diseases can provide clues for novel therapeutic strategies. Here, we collected, compiled, and manually curated the MPE gene mutation and expression variations data and their association with diseases in a single platform named mitoPADdb. The database contains 810 genes with 18,356 mutations and 1284 qualitative expression variations associated with 1793 diseases, grouped into 15 categories. It allows users to perform a comparative quantitative gene expression analysis for 317 transcriptomic studies across disease categories. Further, it provides information on MPE genes-associated molecular pathways. The mitoPADdb is a valuable resource for investigating mitochondrial dysfunction-related diseases. It can be accessed via http://bicresources.jcbose.ac.in/ssaha4/mitopaddb/index.html.

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mitoPADdb:与疾病相关的线粒体蛋白质数据库。
线粒体蛋白/基因突变和表达变异是神经退行性疾病和代谢性疾病等多种疾病的发病机制之一。对不同疾病的线粒体蛋白编码(MPE)基因进行详细研究可为新型治疗策略提供线索。在此,我们收集、编译并人工整理了MPE基因突变和表达变异数据及其与疾病的关联,并将其整合到一个名为mitoPADdb的平台中。该数据库包含与1793种疾病相关的810个基因的18356个突变和1284个定性表达变异,分为15个类别。用户可以利用该数据库对 317 种疾病类别的转录组研究进行基因表达定量比较分析。此外,它还提供与 MPE 基因相关的分子通路信息。mitoPADdb 是研究线粒体功能障碍相关疾病的宝贵资源。可通过 http://bicresources.jcbose.ac.in/ssaha4/mitopaddb/index.html 访问。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Mitochondrion
Mitochondrion 生物-细胞生物学
CiteScore
9.40
自引率
4.50%
发文量
86
审稿时长
13.6 weeks
期刊介绍: Mitochondrion is a definitive, high profile, peer-reviewed international research journal. The scope of Mitochondrion is broad, reporting on basic science of mitochondria from all organisms and from basic research to pathology and clinical aspects of mitochondrial diseases. The journal welcomes original contributions from investigators working in diverse sub-disciplines such as evolution, biophysics, biochemistry, molecular and cell biology, genetics, pharmacology, toxicology, forensic science, programmed cell death, aging, cancer and clinical features of mitochondrial diseases.
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