A mathematical model for wound healing in the reef-building coral Pocillopora damicornis

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2024-07-04 DOI:10.1016/j.jtbi.2024.111897
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Abstract

Coral reefs, among the most diverse ecosystems on Earth, currently face major threats from pollution, unsustainable fishing practices , and perturbations in environmental parameters brought on by climate change. Corals also sustain regular wounding from other sea life and human activity. Recent reef restoration practices have even involved intentional wounding by systematically breaking coral fragments and relocating them to revitalize damaged reefs, a practice known as microfragmentation. Despite its importance, very little research has explored the inner mechanisms of wound healing in corals. Some reef-building corals have been observed to initiate an immunological response to wounding similar to that observed in mammalian species. Utilizing prior models of wound healing in mammalian species as the mathematical basis, we formulated a mechanistic model of wound healing, including observations of the immune response and tissue repair in scleractinian corals for the species Pocillopora damicornis. The model consists of four differential equations which track changes in remaining wound debris, number of cells involved in inflammation, number of cells involved in proliferation, and amount of wound closure through re-epithelialization. The model is fit to experimental wound size data from linear and circular shaped wounds on a live coral fragment. Mathematical methods, including numerical simulations and local sensitivity analysis, were used to analyze the resulting model. The parameter space was also explored to investigate drivers of other possible wound outcomes. This model serves as a first step in generating mathematical models for wound healing in corals that will not only aid in the understanding of wound healing as a whole, but also help optimize reef restoration practices and predict recovery behavior after major wounding events.

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造礁珊瑚 Pocillopora damicornis 伤口愈合的数学模型。
珊瑚礁是地球上最多样化的生态系统之一,目前正面临着污染、不可持续的捕鱼方式以及气候变化对环境参数造成的干扰等重大威胁。珊瑚还经常受到其他海洋生物和人类活动的伤害。最近的珊瑚礁修复实践甚至涉及故意伤害,即有计划地打碎珊瑚碎片并将其重新安置,以恢复受损珊瑚礁的活力,这种做法被称为 "微碎片化"(microfragmentation)。尽管这很重要,但很少有研究探讨珊瑚伤口愈合的内在机制。据观察,一些造礁珊瑚会对伤口产生免疫反应,这种反应类似于哺乳动物。以哺乳动物伤口愈合的先前模型为数学基础,我们建立了一个伤口愈合的机理模型,其中包括对大角藻类(Pocillopora damicornis)硬骨珊瑚的免疫反应和组织修复的观察。该模型由四个微分方程组成,分别跟踪剩余伤口碎片、参与炎症的细胞数量、参与增殖的细胞数量以及通过再上皮化实现伤口闭合的数量的变化。该模型与活珊瑚碎片上线形和圆形伤口的实验伤口大小数据相匹配。数学方法,包括数值模拟和局部敏感性分析,被用来分析得出的模型。还探索了参数空间,以研究其他可能的伤口结果的驱动因素。该模型是建立珊瑚伤口愈合数学模型的第一步,它不仅有助于了解伤口愈合的整体情况,还有助于优化珊瑚礁修复实践和预测重大伤口事件后的恢复行为。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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