Development and internal validation of a clinical risk score to predict incident renal and pulmonary tumours in people with tuberous sclerosis complex.

IF 3.5 2区 医学 Q2 GENETICS & HEREDITY Journal of Medical Genetics Pub Date : 2024-09-24 DOI:10.1136/jmg-2023-109717
Frédéric Loubert, Andrew A House, Catherine Larochelle, Philippe Major, Mark R Keezer
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Abstract

Objective: This study aims to develop and internally validate a clinical risk score to predict incident renal angiomyolipoma (AML) and pulmonary lymphangioleiomyomatosis (LAM) in people with tuberous sclerosis complex (TSC).

Study design: Data from 2420 participants in the TSC Alliance Natural History Database were leveraged for these analyses. Logistic regression was used to predict AML and LAM development using 10 early-onset clinical manifestations of TSC as potential predictors, in addition to sex and genetic mutation. For our models, we divided AML into three separate outcomes: presence or absence of AML, unilateral or bilateral and whether any are ≥3 cm in diameter. The resulting regression models were turned into clinical risk scores which were then internally validated using bootstrap resampling, measuring discrimination and calibration.

Results: The lowest clinical risk scores predicted a risk of AML and LAM of 1% and 0%, while the highest scores predicted a risk of 99% and 73%, respectively. Calibration was excellent for all three AML outcomes and good for LAM. Discrimination ranged from good to strong. C-statistics of 0.84, 0.83, 0.83 and 0.92 were seen for AML, bilateral AML, AML with a lesion≥3 cm and LAM, respectively.

Conclusion: Our work is an important step towards identifying individuals who could benefit from preventative strategies as well as more versus less frequent screening imaging. We expect that our work will allow for more personalised medicine in people with TSC. External validation of the risk scores will be important to confirm the robustness of our findings.

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开发临床风险评分并进行内部验证,以预测结节性硬化症复合体患者的肾脏和肺部肿瘤发病率。
研究目的本研究旨在开发并在内部验证一种临床风险评分,以预测结节性硬化症复合体(TSC)患者发生肾血管肌脂肪瘤(AML)和肺淋巴管瘤(LAM)的风险:研究设计:利用TSC联盟自然病史数据库中2420名参与者的数据进行分析。除了性别和基因突变外,我们还使用逻辑回归法预测急性髓细胞性白血病和结节性硬化症的发展,并将TSC的10种早期临床表现作为潜在的预测因素。在建立模型时,我们将急性髓细胞性白血病分为三个独立的结果:是否存在急性髓细胞性白血病、单侧或双侧以及是否有直径≥3厘米的急性髓细胞性白血病。由此产生的回归模型被转化为临床风险评分,然后使用引导重采样法对这些评分进行内部验证,测量辨别度和校准度:结果:最低临床风险评分预测的急性髓细胞性白血病和淋巴瘤风险分别为1%和0%,而最高评分预测的风险分别为99%和73%。所有三种急性髓细胞性白血病结果的校准结果都非常好,而 LAM 的校准结果也很好。区分度从好到强不等。急性髓细胞性白血病、双侧急性髓细胞性白血病、病变≥3厘米的急性髓细胞性白血病和LAM的C统计量分别为0.84、0.83、0.83和0.92:我们的工作是确定哪些人可以从预防策略以及更频繁或更不频繁的筛查成像中获益的重要一步。我们希望我们的工作能为 TSC 患者提供更加个性化的医疗服务。风险评分的外部验证对于确认我们研究结果的可靠性非常重要。
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来源期刊
Journal of Medical Genetics
Journal of Medical Genetics 医学-遗传学
CiteScore
7.60
自引率
2.50%
发文量
92
审稿时长
4-8 weeks
期刊介绍: Journal of Medical Genetics is a leading international peer-reviewed journal covering original research in human genetics, including reviews of and opinion on the latest developments. Articles cover the molecular basis of human disease including germline cancer genetics, clinical manifestations of genetic disorders, applications of molecular genetics to medical practice and the systematic evaluation of such applications worldwide.
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