Integrating fNIRS and machine learning: shedding light on Parkinson's disease detection.

IF 3.8 3区 生物学 Q1 BIOLOGY EXCLI Journal Pub Date : 2024-05-14 eCollection Date: 2024-01-01 DOI:10.17179/excli2024-7151
Edgar Guevara, Gabriel Solana-Lavalle, Roberto Rosas-Romero
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Abstract

The purpose of this research is to introduce an approach to assist the diagnosis of Parkinson's disease (PD) by classifying functional near-infrared spectroscopy (fNIRS) studies as PD positive or negative. fNIRS is a non-invasive optical signal modality that conveys the brain's hemodynamic response, specifically changes in blood oxygenation in the cerebral cortex; and its potential as a tool to assist PD detection deserves to be explored since it is non-invasive and cost-effective as opposed to other neuroimaging modalities. Besides the integration of fNIRS and machine learning, a contribution of this work is that various approaches were implemented and tested to find the implementation that achieves the highest performance. All the implementations used a logistic regression model for classification. A set of 792 temporal and spectral features were extracted from each participant's fNIRS study. In the two best performing implementations, an ensemble of feature-ranking techniques was used to select a reduced feature subset, which was subsequently reduced with a genetic algorithm. Achieving optimal detection performance, our approach reached 100 % accuracy, precision, and recall, with an F1 score and area under the curve (AUC) of 1, using 14 features. This significantly advances PD diagnosis, highlighting the potential of integrating fNIRS and machine learning for non-invasive PD detection.

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将 fNIRS 与机器学习相结合:揭示帕金森病的检测方法。
fNIRS 是一种非侵入性的光学信号模式,可传递大脑的血流动力学反应,特别是大脑皮层的血氧变化;与其他神经成像模式相比,fNIRS 具有非侵入性和成本效益高的特点,因此其作为辅助帕金森病(PD)检测工具的潜力值得探索。除了将 fNIRS 与机器学习相结合外,这项工作的一个贡献是实施并测试了各种方法,以找到性能最高的实施方法。所有实施方法都使用逻辑回归模型进行分类。从每位参与者的 fNIRS 研究中提取了一组 792 个时间和光谱特征。在两个性能最好的实施方案中,使用了一组特征排序技术来选择一个缩小的特征子集,然后使用遗传算法对其进行缩小。我们的方法达到了最佳检测性能,使用 14 个特征,准确率、精确度和召回率均为 100%,F1 分数和曲线下面积(AUC)均为 1。这大大推进了帕金森病的诊断,凸显了将 fNIRS 与机器学习相结合用于无创帕金森病检测的潜力。
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来源期刊
EXCLI Journal
EXCLI Journal BIOLOGY-
CiteScore
8.00
自引率
2.20%
发文量
65
审稿时长
6-12 weeks
期刊介绍: EXCLI Journal publishes original research reports, authoritative reviews and case reports of experimental and clinical sciences. The journal is particularly keen to keep a broad view of science and technology, and therefore welcomes papers which bridge disciplines and may not suit the narrow specialism of other journals. Although the general emphasis is on biological sciences, studies from the following fields are explicitly encouraged (alphabetical order): aging research, behavioral sciences, biochemistry, cell biology, chemistry including analytical chemistry, clinical and preclinical studies, drug development, environmental health, ergonomics, forensic medicine, genetics, hepatology and gastroenterology, immunology, neurosciences, occupational medicine, oncology and cancer research, pharmacology, proteomics, psychiatric research, psychology, systems biology, toxicology
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