1H HYSCORE Studies of Second Sphere Variants of the Type 1 Copper Site in Azurin: Influence of Mutations on the Hyperfine Couplings of Cys112 CβH2 Protons

IF 1.1 4区 物理与天体物理 Q4 PHYSICS, ATOMIC, MOLECULAR & CHEMICAL Applied Magnetic Resonance Pub Date : 2024-07-09 DOI:10.1007/s00723-024-01665-9
Quan Lam, Casey Van Stappen, Yi Lu, Sergei A. Dikanov
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Abstract

In this work, we examined the influence of F114P, F114N, and N47S mutations on the electronic structure of the T1 copper center in azurin (Az) by studying the hyperfine couplings of CβH2 protons of Cys112 using the two-dimensional (2D) pulsed EPR technique HYSCORE (hyperfine sublevel correlation). Our results show that isotropic hyperfine couplings for the two Cys112 Cβ protons in WTAz, F114NAz, and N47SAz vary within 21 ± 2 MHz, with differences of only several tenths of MHz between the two protons in a given protein despite major variations previously observed in SC112 electron density. Furthermore, significantly smaller couplings of 0.7 MHz and 7.4 MHz are observed for the F114PAz mutation—which eliminates a backbone amide H-bonding interaction with SC112—despite previous observations of a significant increase in S character in the SOMO, demonstrating a more complex relationship between Cβ1H hyperfine and the unpaired spin density of SC112 than previously proposed. In addition, the 2D HYSCORE spectra show resolvable differences in the anisotropic couplings between the two protons in all samples, indicating inconsistencies between previously reported ENDOR and computational data for the WTAz protein. Other findings visible in 2D spectra is the distortion of the cross-ridges from Cys112 CβH2 protons with the large isotropic couplings resulted from aiso strain produced by the fluctuations of the Cβ‒H2 group orientation within θ ~ ± 2° degrees around the most populated conformation.

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Azurin 中 1 型铜位点第二球变体的 1H HYSCORE 研究:突变对 Cys112 CβH2 质子超细耦合的影响
在这项工作中,我们利用二维(2D)脉冲 EPR 技术 HYSCORE(超线性子级相关)研究了 Cys112 的 CβH2 质子的超线性耦合,从而考察了 F114P、F114N 和 N47S 突变对氮杂环苷(Az)中 T1 铜中心电子结构的影响。我们的研究结果表明,在 WTAz、F114NAz 和 N47SAz 中,两个 Cys112 Cβ 质子的各向同性超线性耦合在 21 ± 2 MHz 范围内变化,尽管之前在 SC112 电子密度中观察到了很大的变化,但在给定蛋白质中,两个质子之间的差异仅为万分之几 MHz。此外,F114PAz 突变消除了与 SC112 之间的骨架酰胺 H 键相互作用,尽管之前在 SOMO 中观察到 S 特性显著增加,但仍观察到 0.7 MHz 和 7.4 MHz 的较小耦合,这表明 Cβ-1H 超频与 SC112 的非配对自旋密度之间的关系比之前提出的更为复杂。此外,二维 HYSCORE 光谱显示所有样品中两个质子之间的各向异性耦合存在可解决的差异,这表明之前报告的 WTAz 蛋白的ENDOR 和计算数据之间存在不一致。二维光谱中可见的其他发现是,Cys112 CβH2 质子的交叉脊扭曲,各向同性耦合较大,这是由于 Cβ-H2 基团取向在最多构象周围 θ ~ ± 2° 度范围内波动所产生的 aiso 应变造成的。
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来源期刊
Applied Magnetic Resonance
Applied Magnetic Resonance 物理-光谱学
CiteScore
1.90
自引率
10.00%
发文量
59
审稿时长
2.3 months
期刊介绍: Applied Magnetic Resonance provides an international forum for the application of magnetic resonance in physics, chemistry, biology, medicine, geochemistry, ecology, engineering, and related fields. The contents include articles with a strong emphasis on new applications, and on new experimental methods. Additional features include book reviews and Letters to the Editor.
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