ReactionMechanismSimulator.jl: A modern approach to chemical kinetic mechanism simulation and analysis

IF 1.5 4区 化学 Q4 CHEMISTRY, PHYSICAL International Journal of Chemical Kinetics Pub Date : 2024-07-05 DOI:10.1002/kin.21753
Matthew S. Johnson, Hao-Wei Pang, Allen Mark Payne, William H. Green
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Abstract

We present ReactionMechanismSimulator.jl (RMS), a modern differentiable software for the simulation and analysis of chemical kinetic mechanisms, including multiphase systems. RMS has already been applied to problems in combustion, pyrolysis, polymers, pharmaceuticals, catalysis, and electrocatalysis. RMS is written in Julia, making it easy to develop and allowing it to take advantage of Julia's extensive numerical computing ecosystem. In addition to its extensive library of optimized analytic Jacobians, RMS can generate and use Jacobians computed using automatic differentiation and symbolically generated analytic Jacobians. RMS is demonstrated to be faster than Cantera and Chemkin in several benchmarks. RMS also implements an extensive set of features for analyzing chemical mechanisms, including a library of easy-to-call plotting functions, molecular structure resolved flux diagram generation, crash analysis, traditional sensitivity analysis, transitory sensitivity analysis, and an automatic mechanism analysis toolkit. RMS implements efficient adjoint and parallel forward sensitivity analyses. We also demonstrate the ease of adding new features to RMS.

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ReactionMechanismSimulator.jl:化学动力学机制模拟和分析的现代方法
我们介绍 ReactionMechanismSimulator.jl (RMS),这是一款用于模拟和分析化学动力学机制(包括多相系统)的现代可微分软件。RMS 已被应用于解决燃烧、热解、聚合物、制药、催化和电催化等方面的问题。RMS 是用 Julia 编写的,因此易于开发,并能利用 Julia 广泛的数值计算生态系统。除了拥有庞大的优化解析雅各布函数库外,RMS 还能生成和使用通过自动微分和符号生成的解析雅各布函数计算的雅各布函数。在多个基准测试中,RMS 的速度均优于 Cantera 和 Chemkin。RMS 还为化学机理分析提供了大量功能,包括易于调用的绘图函数库、分子结构解析通量图生成、碰撞分析、传统灵敏度分析、短暂灵敏度分析和自动机理分析工具包。RMS 实现了高效的邻接和并行前向灵敏度分析。我们还演示了为 RMS 添加新功能的便捷性。
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来源期刊
CiteScore
3.30
自引率
6.70%
发文量
74
审稿时长
3 months
期刊介绍: As the leading archival journal devoted exclusively to chemical kinetics, the International Journal of Chemical Kinetics publishes original research in gas phase, condensed phase, and polymer reaction kinetics, as well as biochemical and surface kinetics. The Journal seeks to be the primary archive for careful experimental measurements of reaction kinetics, in both simple and complex systems. The Journal also presents new developments in applied theoretical kinetics and publishes large kinetic models, and the algorithms and estimates used in these models. These include methods for handling the large reaction networks important in biochemistry, catalysis, and free radical chemistry. In addition, the Journal explores such topics as the quantitative relationships between molecular structure and chemical reactivity, organic/inorganic chemistry and reaction mechanisms, and the reactive chemistry at interfaces.
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Issue Information Issue Information Issue Information Decomposition of CH 3 NH 2 ${\rm CH}_3{\rm NH}_2$ : Implications for CH x / NH y ${\rm CH}_{\rm {\it x}}/{\rm NH}_{\rm {\it y}}$ radical–radical reactions Force training neural network potential energy surface models
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