Resolving multi-image spatial lipidomic responses to inhaled toxicants by machine learning

Nathanial Chase Stevens, Tong Shen, Joshua Martinez, Veneese JB Evans, Morgan C Domanico, Elizabeth K Neumann, Laura S Van Winkle, Oliver Fiehn
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Abstract

Regional responses to inhaled toxicants are essential to understand the pathogenesis of lung disease under exposure to air pollution. We evaluated the effect of combined allergen sensitization and ozone exposure on eliciting spatial differences in lipid distribution in the mouse lung that may contribute to ozone-induced exacerbations in asthma. Lung lobes from male and female BALB/c mice were cryosectioned and acquired by high resolution mass spectrometry imaging (MSI). Processed MSI peak annotations were validated by LC-MS/MS data from scraped tissue slides and microdissected lung tissue. Images were normalized and segmented into clusters. Interestingly, segmented clusters overlapped with stained serial tissue sections, enabling statistical analysis across biological replicates for morphologically relevant lung regions. Spatially distinct lipids had higher overall degree of unsaturated fatty acids in distal lung regions compared to proximal regions. Furthermore, the airway and alveolar epithelium exhibited significantly decreased sphingolipid and glycerophospholipid abundance in females, but not in males. We demonstrate the potential role of lipid saturation in healthy lung function and highlight sex differences in regional lung lipid distribution following ozone exposure. Our study provides a framework for future MSI experiments capable of relative quantification across biological replicates and expansion to multiple sample types, including human tissue.
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通过机器学习解析多图像空间脂质体对吸入毒物的反应
对吸入性毒物的区域反应对于了解暴露于空气污染下肺部疾病的发病机理至关重要。我们评估了过敏原致敏和臭氧暴露对引起小鼠肺部脂质分布空间差异的影响,这种差异可能会导致臭氧诱发的哮喘加重。对雄性和雌性 BALB/c 小鼠的肺叶进行冷冻切片,并通过高分辨率质谱成像(MSI)进行采集。处理后的 MSI 峰注释通过刮取的组织切片和显微解剖肺组织的 LC-MS/MS 数据进行验证。对图像进行归一化处理,并分割成群。有趣的是,分割后的簇与染色的序列组织切片重叠,从而可以对形态相关的肺部区域进行跨生物重复的统计分析。与近端区域相比,远端肺部区域空间上不同的脂质中不饱和脂肪酸的总体含量更高。此外,女性气道和肺泡上皮细胞的鞘脂和甘油磷脂丰度显著降低,而男性则没有。我们证明了脂质饱和度在健康肺功能中的潜在作用,并强调了暴露于臭氧后肺部脂质分布的性别差异。我们的研究为未来的 MSI 实验提供了一个框架,使其能够在生物重复样本中进行相对定量,并扩展到包括人体组织在内的多种样本类型。
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