SMCHD1 activates the expression of genes required for the expansion of human myoblasts.

IF 16.6 2区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY Nucleic Acids Research Pub Date : 2024-09-09 DOI:10.1093/nar/gkae600
Matthew Man-Kin Wong, Sarah Hachmer, Ed Gardner, Valeria Runfola, Eric Arezza, Lynn A Megeney, Charles P Emerson, Davide Gabellini, F Jeffrey Dilworth
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Abstract

SMCHD1 is an epigenetic regulatory protein known to modulate the targeted repression of large chromatin domains. Diminished SMCHD1 function in muscle fibers causes Facioscapulohumeral Muscular Dystrophy (FSHD2) through derepression of the D4Z4 chromatin domain, an event which permits the aberrant expression of the disease-causing gene DUX4. Given that SMCHD1 plays a broader role in establishing the cellular epigenome, we examined whether loss of SMCHD1 function might affect muscle homeostasis through additional mechanisms. Here we show that acute depletion of SMCHD1 results in a DUX4-independent defect in myoblast proliferation. Genomic and transcriptomic experiments determined that SMCHD1 associates with enhancers of genes controlling cell cycle to activate their expression. Amongst these cell cycle regulatory genes, we identified LAP2 as a key target of SMCHD1 required for the expansion of myoblasts, where the ectopic expression of LAP2 rescues the proliferation defect of SMCHD1-depleted cells. Thus, the epigenetic regulator SMCHD1 can play the role of a transcriptional co-activator for maintaining the expression of genes required for muscle progenitor expansion. This DUX4-independent role for SMCHD1 in myoblasts suggests that the pathology of FSHD2 may be a consequence of defective muscle regeneration in addition to the muscle wasting caused by spurious DUX4 expression.

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SMCHD1 可激活人类肌母细胞扩增所需的基因表达。
SMCHD1 是一种表观遗传调控蛋白,已知可调节大染色质结构域的定向抑制。SMCHD1 在肌肉纤维中的功能减弱会通过解除对 D4Z4 染色质结构域的抑制而导致面肩胛肱肌营养不良症(FSHD2),这一事件允许致病基因 DUX4 的异常表达。鉴于 SMCHD1 在建立细胞表观基因组方面发挥着更广泛的作用,我们研究了 SMCHD1 功能的丧失是否会通过其他机制影响肌肉的稳态。在这里,我们发现急性缺失 SMCHD1 会导致独立于 DUX4 的成肌细胞增殖缺陷。基因组和转录组实验确定,SMCHD1 与控制细胞周期基因的增强子相关联,以激活它们的表达。在这些细胞周期调控基因中,我们发现 LAP2 是 SMCHD1 扩增成肌细胞所需的一个关键靶点,异位表达 LAP2 可挽救 SMCHD1 缺失细胞的增殖缺陷。因此,表观遗传调控因子 SMCHD1 可发挥转录共激活因子的作用,维持肌肉祖细胞扩增所需基因的表达。SMCHD1在成肌细胞中的这种不依赖于DUX4的作用表明,FSHD2的病理可能是肌肉再生缺陷的结果,而不是由DUX4的错误表达引起的肌肉萎缩。
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来源期刊
Nucleic Acids Research
Nucleic Acids Research 生物-生化与分子生物学
CiteScore
27.10
自引率
4.70%
发文量
1057
审稿时长
2 months
期刊介绍: Nucleic Acids Research (NAR) is a scientific journal that publishes research on various aspects of nucleic acids and proteins involved in nucleic acid metabolism and interactions. It covers areas such as chemistry and synthetic biology, computational biology, gene regulation, chromatin and epigenetics, genome integrity, repair and replication, genomics, molecular biology, nucleic acid enzymes, RNA, and structural biology. The journal also includes a Survey and Summary section for brief reviews. Additionally, each year, the first issue is dedicated to biological databases, and an issue in July focuses on web-based software resources for the biological community. Nucleic Acids Research is indexed by several services including Abstracts on Hygiene and Communicable Diseases, Animal Breeding Abstracts, Agricultural Engineering Abstracts, Agbiotech News and Information, BIOSIS Previews, CAB Abstracts, and EMBASE.
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