Development of a DNA macroarray for the molecular biological identification of trade-relevant tropical CITES timber species and their look-alikes

IF 2.2 3区 农林科学 Q2 FORESTRY Holzforschung Pub Date : 2024-07-17 DOI:10.1515/hf-2023-0114
Anna C. Bogun, K. Paredes-Villanueva, Maurizio Mascarello, Elisabeth A. Magel
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Abstract

The control authorities of timber trade lack quick and easy methods to verify the legality of the traded product. This includes the clear identification of the timber species. In this study, a simple genetic method, the macroarray technique, was modified and optimised for this purpose. The internal transcribed spacer (ITS) was used as barcode region. Specific probes were designed and tested using this barcode of trade-relevant, CITES protected wood species and their look-alikes. The results reveal that 61 of these probes are suitable for identification purposes. Hence, 32 of the 50 investigated species can be clearly identified using the developed macroarray. Additional 15 species are represented by probes in groups of two to three species, which enables a delimitation of the species present. For four species, no identification was possible applying the probes created. The findings indicate the potential of time and cost savings compared to currently established methods in species control in the timber trade.
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开发用于对《濒危野生动植物种国际贸易公约》相关热带木材物种及其相似物种进行分子生物学鉴定的 DNA 宏阵列
木材贸易管制当局缺乏快速简便的方法来核实贸易产品的合法性。这包括明确识别木材种类。在这项研究中,对一种简单的遗传方法--宏阵列技术进行了修改和优化。内部转录间隔区 (ITS) 被用作条形码区域。利用该条形码设计并测试了与贸易相关的、受《濒危野生动植物种国际贸易公约》保护的木材物种及其相似物种的特定探针。结果显示,其中 61 个探针适用于鉴定目的。因此,使用开发的宏阵列可以清楚地识别 50 个调查物种中的 32 个。另有 15 个物种的探针以 2 到 3 个物种为一组,这就可以对存在的物种进行划分。有 4 个物种的探针无法识别。研究结果表明,与木材贸易中现有的物种控制方法相比,该方法具有节省时间和成本的潜力。
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来源期刊
Holzforschung
Holzforschung 工程技术-材料科学:纸与木材
CiteScore
4.60
自引率
4.20%
发文量
83
审稿时长
3.3 months
期刊介绍: Holzforschung is an international scholarly journal that publishes cutting-edge research on the biology, chemistry, physics and technology of wood and wood components. High quality papers about biotechnology and tree genetics are also welcome. Rated year after year as one of the top scientific journals in the category of Pulp and Paper (ISI Journal Citation Index), Holzforschung represents innovative, high quality basic and applied research. The German title reflects the journal''s origins in a long scientific tradition, but all articles are published in English to stimulate and promote cooperation between experts all over the world. Ahead-of-print publishing ensures fastest possible knowledge transfer.
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