SwissADME studies and Density Functional Theory (DFT) approaches of methyl substituted curcumin derivatives

IF 2.6 4区 生物学 Q2 BIOLOGY Computational Biology and Chemistry Pub Date : 2024-07-15 DOI:10.1016/j.compbiolchem.2024.108153
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Abstract

Research suggests curcumin's safety and efficacy, prompting interest in its use for treating and preventing various human diseases. The current study aimed to predict drag ability of methyl substituted curcumin derivatives (BL1 to BL4) using SwissADME and Density Functional Theory (DFT) approaches. The curcumin derivatives investigated mostly adhere to Lipinski's rule of five, with molecular properties including MW, F. Csp3, nHBA, nHBD, and TPSA falling within acceptable limits. The compounds demonstrating high lipophilicity while poor water solubility. The pharmacokinetic evaluation revealed favorable gastrointestinal absorption and blood-brain barrier permeation while none were identified as substrates for P-glycoprotein, however, revealed inhibitory actions against various cytochrome P450 enzymes. Additionally, all derivatives exhibited a consistent bioavailability score of 0.55. Similarly, the DFT computations of the compounds of the curcumin derivatives were conducted at B3LYP/6–311 G** level to predict and then assess the key electronic characteristics underlying the bioactivity. Accordingly, the BL4 molecule (ΔEgap= 4.105 eV) would prefer to interact with the external molecular system more than the other molecules due to having the biggest energy gap. The ΔNmax (2.328 eV) and Δεback-donat. (-0.446 eV) scores implied that BL1 would have more charge transfer capability and the lowest stability via back donation among the compounds. In short, the derivative (BL1 to BL4) exhibited strong extrinsic therapeutic properties and therefore stand eligible for further in vitro and in vivo studies.

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姜黄素甲基取代衍生物的 SwissADME 研究和密度泛函理论 (DFT) 方法
研究表明姜黄素具有安全性和有效性,从而引起了人们对其用于治疗和预防各种人类疾病的兴趣。本研究旨在利用 SwissADME 和密度泛函理论(DFT)方法预测姜黄素甲基取代衍生物(BL1 至 BL4)的拖曳能力。所研究的姜黄素衍生物大多符合李宾斯基五定律,其分子性质包括分子量、F. Csp3、nHBA、nHBD 和 TPSA,均在可接受的范围内。这些化合物具有较高的亲脂性,但水溶性较差。药代动力学评估显示,这些化合物具有良好的胃肠道吸收和血脑屏障渗透性,但没有一种被鉴定为 P 糖蛋白的底物,不过却显示出对各种细胞色素 P450 酶的抑制作用。此外,所有衍生物的生物利用度得分均为 0.55。同样,我们在 B3LYP/6-311 G** 水平上对姜黄素衍生物化合物进行了 DFT 计算,以预测并评估生物活性的关键电子特性。据此,BL4 分子(ΔEgap= 4.105 eV)由于具有最大的能隙,比其他分子更倾向于与外部分子系统相互作用。ΔNmax(2.328 eV)和 Δεback-donat.(-0.446 eV) 的得分表明,BL1 具有更强的电荷转移能力,并且是所有化合物中通过反向捐赠实现稳定性最低的。总之,衍生物(BL1 至 BL4)表现出很强的外在治疗特性,因此有资格进行进一步的体外和体内研究。
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来源期刊
Computational Biology and Chemistry
Computational Biology and Chemistry 生物-计算机:跨学科应用
CiteScore
6.10
自引率
3.20%
发文量
142
审稿时长
24 days
期刊介绍: Computational Biology and Chemistry publishes original research papers and review articles in all areas of computational life sciences. High quality research contributions with a major computational component in the areas of nucleic acid and protein sequence research, molecular evolution, molecular genetics (functional genomics and proteomics), theory and practice of either biology-specific or chemical-biology-specific modeling, and structural biology of nucleic acids and proteins are particularly welcome. Exceptionally high quality research work in bioinformatics, systems biology, ecology, computational pharmacology, metabolism, biomedical engineering, epidemiology, and statistical genetics will also be considered. Given their inherent uncertainty, protein modeling and molecular docking studies should be thoroughly validated. In the absence of experimental results for validation, the use of molecular dynamics simulations along with detailed free energy calculations, for example, should be used as complementary techniques to support the major conclusions. Submissions of premature modeling exercises without additional biological insights will not be considered. Review articles will generally be commissioned by the editors and should not be submitted to the journal without explicit invitation. However prospective authors are welcome to send a brief (one to three pages) synopsis, which will be evaluated by the editors.
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