A treecode algorithm for the Poisson equation in a general domain with unstructured grids

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2024-07-18 DOI:10.1007/s11075-024-01888-8
Zixuan Cui, Lei Yang, Jing Wu, Guanghui Hu
{"title":"A treecode algorithm for the Poisson equation in a general domain with unstructured grids","authors":"Zixuan Cui, Lei Yang, Jing Wu, Guanghui Hu","doi":"10.1007/s11075-024-01888-8","DOIUrl":null,"url":null,"abstract":"<p>Since the seminal work in 1986, the treecode algorithm has been widely used in a variety of science and engineering problems, such as the electrostatic and magnetostatic fields calculations. With the continuous advancements of science exploration and engineering applications, efficient numerical simulations for problems defined on complex domains have become increasingly necessary. In this paper, based on a hierarchy geometry tree, an efficient implementation of the treecode algorithm is described in detail for the numerical solution of a Poisson equation defined on a general domain. The features of our algorithm include: i) with the hierarchy geometry tree, the neighbor and non-neighbor patches for a given element can be generated efficiently, ii) no restriction on the geometry of the domain, which means that our algorithm can be applied for general problem, iii) the desired computational complexity <span>\\({\\varvec{\\mathcal {O}}}(\\varvec{N}\\,\\varvec{\\log }\\,{\\varvec{N}})\\)</span> can be observed well, where <span>\\(\\varvec{N}\\)</span> denotes the number of degrees of freedom in the domain, and iv) very friendly to the parallel computing, i.e., an ideal speedup can be observed successfully from numerical results with OpenMP technique. It is believed that our solution potentially is a quality candidate for implementing the treecode algorithm for problems defined on general domains with unstructured grids.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2024-07-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1007/s11075-024-01888-8","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

Abstract

Since the seminal work in 1986, the treecode algorithm has been widely used in a variety of science and engineering problems, such as the electrostatic and magnetostatic fields calculations. With the continuous advancements of science exploration and engineering applications, efficient numerical simulations for problems defined on complex domains have become increasingly necessary. In this paper, based on a hierarchy geometry tree, an efficient implementation of the treecode algorithm is described in detail for the numerical solution of a Poisson equation defined on a general domain. The features of our algorithm include: i) with the hierarchy geometry tree, the neighbor and non-neighbor patches for a given element can be generated efficiently, ii) no restriction on the geometry of the domain, which means that our algorithm can be applied for general problem, iii) the desired computational complexity \({\varvec{\mathcal {O}}}(\varvec{N}\,\varvec{\log }\,{\varvec{N}})\) can be observed well, where \(\varvec{N}\) denotes the number of degrees of freedom in the domain, and iv) very friendly to the parallel computing, i.e., an ideal speedup can be observed successfully from numerical results with OpenMP technique. It is believed that our solution potentially is a quality candidate for implementing the treecode algorithm for problems defined on general domains with unstructured grids.

Abstract Image

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
非结构网格一般域中泊松方程的树形编码算法
自 1986 年的开创性工作以来,树码算法已广泛应用于各种科学和工程问题,如静电场和磁场计算。随着科学探索和工程应用的不断进步,对复杂领域问题进行高效数值模拟变得越来越有必要。本文以层次几何树为基础,详细描述了树代码算法的高效实现,用于数值求解定义在一般域上的泊松方程。我们算法的特点包括i) 利用层次几何树,可以高效生成给定元素的邻域和非邻域补丁;ii) 对域的几何形状没有限制,这意味着我们的算法可以应用于一般问题、(\varvec{N}\,\varvec{log}\,{varvec{N}})\)可以很好地观察到,其中\(\varvec{N}\)表示域中的自由度数,并且 iv) 对并行计算非常友好,即.e.,iv) 对并行计算非常友好,即使用 OpenMP 技术可以成功地从数值结果中观察到理想的加速。我们相信,我们的解决方案有可能成为在具有非结构网格的一般域上实现树代码算法的优质候选方案。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 去求助
来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
期刊最新文献
Management of Cholesteatoma: Hearing Rehabilitation. Congenital Cholesteatoma. Evaluation of Cholesteatoma. Management of Cholesteatoma: Extension Beyond Middle Ear/Mastoid. Recidivism and Recurrence.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1